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P29437 (RL34_BUCAP) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 72. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L34
Gene names
Name:rpmH
Ordered Locus Names:BUsg_013
OrganismBuchnera aphidicola subsp. Schizaphis graminum (strain Sg) [Complete proteome] [HAMAP]
Taxonomic identifier198804 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera

Protein attributes

Sequence length47 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L34P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 474750S ribosomal protein L34 HAMAP-Rule MF_00391
PRO_0000187356

Sequences

Sequence LengthMass (Da)Tools
P29437 [UniParc].

Last modified April 1, 1993. Version 1.
Checksum: B92A0C0932DD8026

FASTA475,663
        10         20         30         40 
MKRTFQPSIL KRNRSHGFRT RMATKNGRYI LSRRRAKLRT RLTVSSK 

« Hide

References

« Hide 'large scale' references
[1]"Genetic analysis of an aphid endosymbiont DNA fragment homologous to the rnpA-rpmH-dnaA-dnaN-gyrB region of eubacteria."
Lai C.-Y., Baumann P.
Gene 113:175-181(1992) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Sequence analysis of a 34.7-kb DNA segment from the genome of Buchnera aphidicola (endosymbiont of aphids) containing groEL, dnaA, the atp operon, gidA, and rho."
Clark M.A., Baumann L., Baumann P.
Curr. Microbiol. 36:158-163(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[3]"50 million years of genomic stasis in endosymbiotic bacteria."
Tamas I., Klasson L., Canbaeck B., Naeslund A.K., Eriksson A.-S., Wernegreen J.J., Sandstroem J.P., Moran N.A., Andersson S.G.E.
Science 296:2376-2379(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Sg.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M80817 Genomic DNA. Translation: AAA73148.1.
AF008210 Genomic DNA. Translation: AAC38105.1.
AE013218 Genomic DNA. Translation: AAM67585.1.
PIRJC1154.
RefSeqNP_660374.1. NC_004061.1.

3D structure databases

ProteinModelPortalP29437.
SMRP29437. Positions 1-46.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING198804.BUsg013.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAM67585; AAM67585; BUsg_013.
GeneID1005829.
KEGGbas:BUsg013.
PATRIC21246781. VBIBucAph100086_0013.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0230.
KOK02914.
OMAMEVSKRQ.
OrthoDBEOG6DZF71.

Enzyme and pathway databases

BioCycBAPH198804:GHMG-13-MONOMER.

Family and domain databases

HAMAPMF_00391. Ribosomal_L34.
InterProIPR000271. Ribosomal_L34.
IPR020939. Ribosomal_L34_CS.
[Graphical view]
PANTHERPTHR14503. PTHR14503. 1 hit.
PfamPF00468. Ribosomal_L34. 1 hit.
[Graphical view]
ProDomPD003101. Ribosomal_L34. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsTIGR01030. rpmH_bact. 1 hit.
PROSITEPS00784. RIBOSOMAL_L34. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL34_BUCAP
AccessionPrimary (citable) accession number: P29437
Entry history
Integrated into UniProtKB/Swiss-Prot: April 1, 1993
Last sequence update: April 1, 1993
Last modified: May 14, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

Buchnera aphidicola (subsp. Schizaphis graminum)

Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names