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Protein

UPF0502 protein YceH

Gene

yceH

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11537-MONOMER.
ECOL316407:JW1054-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0502 protein YceHUniRule annotation
Alternative name(s):
G20.3
Gene namesi
Name:yceHUniRule annotation
Ordered Locus Names:b1067, JW1054
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11537. yceH.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001688191 – 215UPF0502 protein YceHAdd BLAST215

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei80N6-acetyllysineUniRule annotation1 Publication1

Keywords - PTMi

Acetylation

Proteomic databases

EPDiP29217.
PaxDbiP29217.
PRIDEiP29217.

Interactioni

Protein-protein interaction databases

BioGridi4260078. 9 interactors.
DIPiDIP-11527N.
IntActiP29217. 3 interactors.
MINTiMINT-1235937.
STRINGi511145.b1067.

Structurei

3D structure databases

ProteinModelPortaliP29217.
SMRiP29217.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0502 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108YXG. Bacteria.
COG3132. LUCA.
HOGENOMiHOG000217964.
InParanoidiP29217.
KOiK09915.
OMAiTSREPVM.
PhylomeDBiP29217.

Family and domain databases

Gene3Di1.10.10.10. 2 hits.
HAMAPiMF_01584. UPF0502. 1 hit.
InterProiIPR007432. DUF480.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF04337. DUF480. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 2 hits.

Sequencei

Sequence statusi: Complete.

P29217-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKYQLTALEA RVIGCLLEKQ VTTPEQYPLS VNGVVTACNQ KTNREPVMNL
60 70 80 90 100
SESEVQEQLD NLVKRHYLRT VSGFGNRVTK YEQRFCNSEF GDLKLSAAEV
110 120 130 140 150
ALITTLLLRG AQTPGELRSR AARMYEFSDM AEVESTLEQL ANREDGPFVV
160 170 180 190 200
RLAREPGKRE NRYMHLFSGE VEDQPAVTDM SNAVDGDLQA RVEALEIEVA
210
ELKQRLDSLL AHLGD
Length:215
Mass (Da):24,177
Last modified:November 1, 1997 - v3
Checksum:i2D6FF6988022CA68
GO

Sequence cautioni

The sequence AAA24550 differs from that shown. Reason: Frameshift at positions 110 and 211.Curated
The sequence X06118 differs from that shown. Reason: Frameshift at positions 110 and 118.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti133V → E in X06118 (PubMed:2828880).Curated1
Sequence conflicti194A → G in AAA24550 (PubMed:1356970).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M99278 Genomic DNA. Translation: AAA24550.1. Frameshift.
U00096 Genomic DNA. Translation: AAC74151.1.
AP009048 Genomic DNA. Translation: BAA35875.1.
X06118 Genomic DNA. No translation available.
PIRiH64849.
RefSeqiNP_415585.1. NC_000913.3.
WP_000877107.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74151; AAC74151; b1067.
BAA35875; BAA35875; BAA35875.
GeneIDi945633.
KEGGiecj:JW1054.
eco:b1067.
PATRICi32117373. VBIEscCol129921_1109.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M99278 Genomic DNA. Translation: AAA24550.1. Frameshift.
U00096 Genomic DNA. Translation: AAC74151.1.
AP009048 Genomic DNA. Translation: BAA35875.1.
X06118 Genomic DNA. No translation available.
PIRiH64849.
RefSeqiNP_415585.1. NC_000913.3.
WP_000877107.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP29217.
SMRiP29217.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260078. 9 interactors.
DIPiDIP-11527N.
IntActiP29217. 3 interactors.
MINTiMINT-1235937.
STRINGi511145.b1067.

Proteomic databases

EPDiP29217.
PaxDbiP29217.
PRIDEiP29217.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74151; AAC74151; b1067.
BAA35875; BAA35875; BAA35875.
GeneIDi945633.
KEGGiecj:JW1054.
eco:b1067.
PATRICi32117373. VBIEscCol129921_1109.

Organism-specific databases

EchoBASEiEB1499.
EcoGeneiEG11537. yceH.

Phylogenomic databases

eggNOGiENOG4108YXG. Bacteria.
COG3132. LUCA.
HOGENOMiHOG000217964.
InParanoidiP29217.
KOiK09915.
OMAiTSREPVM.
PhylomeDBiP29217.

Enzyme and pathway databases

BioCyciEcoCyc:EG11537-MONOMER.
ECOL316407:JW1054-MONOMER.

Miscellaneous databases

PROiP29217.

Family and domain databases

Gene3Di1.10.10.10. 2 hits.
HAMAPiMF_01584. UPF0502. 1 hit.
InterProiIPR007432. DUF480.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF04337. DUF480. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiYCEH_ECOLI
AccessioniPrimary (citable) accession number: P29217
Secondary accession number(s): P75930
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 1992
Last sequence update: November 1, 1997
Last modified: November 2, 2016
This is version 123 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.