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Reviewed, UniProtKB/Swiss-Prot P29061 (CHIB_TOBAC)

Last modified June 16, 2009. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Basic endochitinase
    EC=3.2.1.14
OrganismNicotiana tabacum (Common tobacco)
Taxonomic identifier4097 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsasteridslamiidsSolanalesSolanaceaeNicotianoideaeNicotianeaeNicotiana

Protein attributes

Sequence length294 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Function

This protein functions as a defense against chitin containing fungal pathogens.

Catalytic activity

Random hydrolysis of N-acetyl-beta-D-glucosaminide (1->4)-beta-linkages in chitin and chitodextrins.

Induction

By TMV infection.

Sequence similarities

Belongs to the glycosyl hydrolase 18 family. Chitinase class II subfamily.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2424
Chain25 – 294270Basic endochitinase
PRO_0000011919

Sites

Active site1511Proton donor By similarity

Amino acid modifications

Disulfide bond44 ↔ 91 By similarity
Disulfide bond74 ↔ 81 By similarity
Disulfide bond182 ↔ 211 By similarity

Sequences

Sequence LengthMass (Da)Tools
P29061-1 [UniParc].

Last modified December 1, 1992. Version 1.
Checksum: 5CE49A1455C70AE1

FASTA29432,393
        10         20         30         40         50         60 
MNIKVSLLFI LPIFLLLLTS KVKAGDIVVY WGQDVGEGKL IDTCNSGLYN IVNIAFLSSF 

        70         80         90        100        110        120 
GNFQTPKLNL AGHCEPSSGG CQQLTKSIRH CQSIGIKIML SIGGGTPTYT LSSVDDARQV 

       130        140        150        160        170        180 
ADYLWNNFLG GQSSFRPLGD AVLDGIDFDI ELGQPHYIAL ARRLSEHGQQ GKKLYLTAAP 

       190        200        210        220        230        240 
QCPFPDKLLN GALQTGLFDY VWVQFYNNPE CEFMSNSENF KRRWNQWTSI PAKKLYIGLP 

       250        260        270        280        290 
AAKTAAGNGY IPKQVLMSQV LPFLKGSSKY GGVMLWNRKF DVQCGYSSAI RGAV 

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References

[1]"Acidic and basic class III chitinase mRNA accumulation in response to TMV infection of tobacco."
Lawton K., Ward E., Payne G., Moyer M., Ryals J.
Plant Mol. Biol. 19:735-743(1992) [PubMed: 1643280] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Strain: cv. Xanthi.
Tissue: Leaf.

Cross-references

Sequence databases

Z11564 mRNA. Translation: CAA77657.1.
PIRS23545.

3D structure databases

HSSPHSSP built from PDB template 2HVM based on UniProtKB P23472.
ModBaseSearch...

Protein family/group databases

CAZyGH18. Glycoside Hydrolase Family 18.

Enzyme and pathway databases

BRENDA3.2.1.14. 298.

Family and domain databases

InterProIPR001223. Glyco_hydro18cat.
IPR001579. Glyco_hydro_18_chit_AS.
IPR013781. Glyco_hydro_sg_catalytic.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PfamPF00704. Glyco_hydro_18. 1 hit.
[Graphical view]
PROSITEPS01095. CHITINASE_18. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameCHIB_TOBAC
AccessionPrimary (citable) accession number: P29061
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 1992
Last sequence update: December 1, 1992
Last modified: June 16, 2009
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectPPAP (Plant Proteome Annotation Project)

Relevant documents

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents