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Protein

Uncharacterized protein YdfB

Gene

ydfB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11301-MONOMER.
ECOL316407:JW1564-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YdfB
Gene namesi
Name:ydfB
Ordered Locus Names:b1572, JW1564
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11301. ydfB.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001689531 – 42Uncharacterized protein YdfBAdd BLAST42

Proteomic databases

PaxDbiP29009.
PRIDEiP29009.

Expressioni

Inductioni

Constitutively expressed (at protein level).1 Publication

Interactioni

Protein-protein interaction databases

STRINGi511145.b1572.

Structurei

3D structure databases

ProteinModelPortaliP29009.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000050181.

Sequencei

Sequence statusi: Complete.

P29009-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40 
MDFDTIMEKA YEEYFEGLAE GEEALSFSEF KQALSSSAKS NG
Length:42
Mass (Da):4,688
Last modified:December 1, 1992 - v1
Checksum:i2FE608C7512F1624
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X07465 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: AAC74645.2.
AP009048 Genomic DNA. Translation: BAA15277.1.
PIRiG64912.
RefSeqiNP_416090.2. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiAAC74645; AAC74645; b1572.
BAA15277; BAA15277; BAA15277.
GeneIDi946176.
KEGGiecj:JW1564.
eco:b1572.
PATRICi32118444. VBIEscCol129921_1642.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X07465 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: AAC74645.2.
AP009048 Genomic DNA. Translation: BAA15277.1.
PIRiG64912.
RefSeqiNP_416090.2. NC_000913.3.

3D structure databases

ProteinModelPortaliP29009.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi511145.b1572.

Proteomic databases

PaxDbiP29009.
PRIDEiP29009.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74645; AAC74645; b1572.
BAA15277; BAA15277; BAA15277.
GeneIDi946176.
KEGGiecj:JW1564.
eco:b1572.
PATRICi32118444. VBIEscCol129921_1642.

Organism-specific databases

EchoBASEiEB1278.
EcoGeneiEG11301. ydfB.

Phylogenomic databases

HOGENOMiHOG000050181.

Enzyme and pathway databases

BioCyciEcoCyc:EG11301-MONOMER.
ECOL316407:JW1564-MONOMER.

Miscellaneous databases

PROiP29009.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiYDFB_ECOLI
AccessioniPrimary (citable) accession number: P29009
Secondary accession number(s): P76166
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 1992
Last sequence update: December 1, 1992
Last modified: November 2, 2016
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.