P28912 (YHHI_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
H repeat-associated protein yhhI

Alternative name(s):
ORF-H

Gene names

Name:	yhhI
Ordered Locus Names:	b3484, JW3451

Organism

Escherichia coli (strain K12)

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	378 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the transposase 11 family.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	transposition, DNA-mediated Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro transposase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 378	378	H repeat-associated protein yhhI		PRO_0000169552

Sequences

	Sequence		Length	Mass (Da)
	P28912 [UniParc]. Last modified December 1, 1992. Version 1. Checksum: BD9F5D600559FE3D	FASTA	378	43,146
	10 20 30 40 50 60 MELKKLMEHI SIIPDYRQTW KVEHKLSDIL LLTICAVISG AEGWEDIEDF GETHLDFLKQ 70 80 90 100 110 120 YGDFENGIPV HDTIARVVSC ISPAKFHECF INWMRDCHSS DDKDVIAIDG KTLRHSYDKS 130 140 150 160 170 180 RRRGAIHVIS AFSTMHSLVI GQIKTDEKSN EITAIPELLN MLDIKGKIIT TDAMGCQKDI 190 200 210 220 230 240 AEKIQKQGGD YLFAVKGTQG RLNKAFEEKF PLKELNNPEH DSYAISEKSH GREEIRLHIV 250 260 270 280 290 300 CDVPDELIDF TFEWKGLKKL CVAVSFRSII AEQKKEPEMT VRYYISSADL TAEKFATAIR 310 320 330 340 350 360 NHWHVENKLH WRLDVVMNED DCKIRRGNAA ELFSGIRHIA INILTNDKVF KAGLRRKMRK 370 AAMDRNYLAS VLAGSGLS

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Rhs elements of Escherichia coli K-12: complex composites of shared and unique components that have different evolutionary histories." Zhao S., Sandt C.H., Feulner G., Vlazny D.A., Gray J.A., Hill C.W. J. Bacteriol. 175:2799-2808(1993) [PubMed: 8387990] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: K12.
[2]	"Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes." Sofia H.J., Burland V., Daniels D.L., Plunkett G. III, Blattner F.R. Nucleic Acids Res. 22:2576-2586(1994) [PubMed: 8041620] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[3]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed: 9278503] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[4]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed: 16738553] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[5]	"Reshuffling of Rhs components to create a new element." Zhao S., Hill C.W. J. Bacteriol. 177:1393-1398(1995) [PubMed: 7868617] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 363-378. Strain: O2:HN / ECOR-50 / P97 / UPEC.

Cross-references

Sequence databases
EMBL GenBank DDBJ	L02370 Genomic DNA. Translation: AAC61885.1. U00039 Genomic DNA. Translation: AAB18459.1. U00096 Genomic DNA. Translation: AAC76509.1. AP009048 Genomic DNA. Translation: BAE77809.1. U15126 Genomic DNA. Translation: AAA66214.1.
PIR	S47703.
RefSeq	NP_417941.1. NC_000913.2.
3D structure databases
ProteinModelPortal	P28912.
ModBase	Search...
Protein-protein interaction databases
IntAct	P28912. 6 interactions.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000004287; EBESCP00000004287; EBESCG00000003497. EBESCT00000015303; EBESCP00000014594; EBESCG00000014363.
GeneID	947992.
GenomeReviews	Gene locus JW3451 in contig AP009048_GR. Gene locus b3484 in contig U00096_GR.
KEGG	ecj:JW3451. eco:b3484.
PATRIC	32122412. VBIEscCol129921_3583.
Organism-specific databases
EchoBASE	EB1487.
EcoGene	EG11525. yhhI.
Phylogenomic databases
eggNOG	COG5433.
GeneTree	EBGT00050000009716.
HOGENOM	HBG702545.
OMA	ITICAVI.
PhylomeDB	P28912.
ProtClustDB	CLSK879592.
Enzyme and pathway databases
BioCyc	EcoCyc:EG11525-MONOMER.
Gene expression databases
Genevestigator	P28912.
Family and domain databases
InterPro	IPR002559. Transposase_11. [Graphical view]
Pfam	PF01609. DDE_Tnp_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

YHHI_ECOLI

Accession

Primary (citable) accession number: P28912
Secondary accession number(s): Q2M7E7

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 1, 1992
Last sequence update:	December 1, 1992
Last modified:	January 25, 2012
This is version 78 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program