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P28711

- VP2_FCVF9

UniProt

P28711 - VP2_FCVF9

Protein

Protein VP2

Gene

ORF3

Organism
Feline calicivirus (strain F9) (FCV)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Minor structural protein present in one or two copies per virion. Does not seem to play a role in capsid assembly, but is essential for production of infectious virus By similarity.By similarity

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein VP2
    Alternative name(s):
    Minor capsid protein
    Gene namesi
    ORF Names:ORF3
    OrganismiFeline calicivirus (strain F9) (FCV)
    Taxonomic identifieri11981 [NCBI]
    Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageCaliciviridaeVesivirus
    Virus hostiFelidae (cat family) [TaxID: 9681]
    ProteomesiUP000008762: Genome

    Subcellular locationi

    Virion. Host cytoplasm By similarity

    GO - Cellular componenti

    1. host cell cytoplasm Source: UniProtKB-SubCell
    2. virion Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Host cytoplasm, Virion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 106106Protein VP2PRO_0000100124Add
    BLAST

    Interactioni

    Subunit structurei

    May interact with capsid protein.By similarity

    Structurei

    3D structure databases

    ProteinModelPortaliP28711.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the vesivirus VP2 protein family.Curated

    Family and domain databases

    InterProiIPR007996. Vesivirus_VP2.
    [Graphical view]
    PfamiPF05332. DUF743. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P28711-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNSILGLIDT VTNTIGKAQQ IELDKAALGQ QRELALQRIG LDRQALNNQV    50
    EQFNKILEQR VQGPIQSVRL ARAAGFRVDP YSYTNQNFYD DQLNAIRLSY 100
    KNLFKI 106
    Length:106
    Mass (Da):12,095
    Last modified:December 1, 1992 - v1
    Checksum:i6CC14546564D75E5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M86379 Genomic RNA. No translation available.
    Z11536 Genomic RNA. Translation: CAA77638.1.
    PIRiC43382.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M86379 Genomic RNA. No translation available.
    Z11536 Genomic RNA. Translation: CAA77638.1 .
    PIRi C43382.

    3D structure databases

    ProteinModelPortali P28711.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    InterProi IPR007996. Vesivirus_VP2.
    [Graphical view ]
    Pfami PF05332. DUF743. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The complete nucleotide sequence of a feline calicivirus."
      Carter M.J., Milton I.D., Meanger J., Bennett M., Gaskell R.M., Turner P.C.
      Virology 190:443-448(1992) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
    2. "Cloning and sequence determination of the feline calicivirus strain F9."
      Meanger J., Carter M.J., Gaskell R.M., Turner P.C.
      Biochem. Soc. Trans. 20:26S-26S(1992) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
    3. "Identification and sequence determination of the capsid protein gene of feline calicivirus."
      Carter M.J., Milton I.D., Turner P.C., Meanger J., Bennett M., Gaskell R.M.
      Arch. Virol. 122:223-235(1992) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
    4. "The mechanism of an exceptional case of reinitiation after translation of a long ORF reveals why such events do not generally occur in mammalian mRNA translation."
      Poyry T.A., Kaminski A., Connell E.J., Fraser C.S., Jackson R.J.
      Genes Dev. 21:3149-3162(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: EXPRESSION.

    Entry informationi

    Entry nameiVP2_FCVF9
    AccessioniPrimary (citable) accession number: P28711
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 1, 1992
    Last sequence update: December 1, 1992
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Translated by a ribosomal terminaition-reinitiation process from the bicistronic mRNA coding for VP1 and VP2.

    Keywords - Technical termi

    Complete proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3