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P28711

- VP2_FCVF9

UniProt

P28711 - VP2_FCVF9

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Protein
Protein VP2
Gene
ORF3
Organism
Feline calicivirus (strain F9) (FCV)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Minor structural protein present in one or two copies per virion. Does not seem to play a role in capsid assembly, but is essential for production of infectious virus By similarity.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein VP2
Alternative name(s):
Minor capsid protein
Gene namesi
ORF Names:ORF3
OrganismiFeline calicivirus (strain F9) (FCV)
Taxonomic identifieri11981 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageCaliciviridaeVesivirus
Virus hostiFelidae (cat family) [TaxID: 9681]
ProteomesiUP000008762: Genome

Subcellular locationi

Virion. Host cytoplasm By similarity

GO - Cellular componenti

  1. host cell cytoplasm Source: UniProtKB-SubCell
  2. virion Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Host cytoplasm, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 106106Protein VP2
PRO_0000100124Add
BLAST

Interactioni

Subunit structurei

May interact with capsid protein By similarity.

Structurei

3D structure databases

ProteinModelPortaliP28711.

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR007996. Vesivirus_VP2.
[Graphical view]
PfamiPF05332. DUF743. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P28711-1 [UniParc]FASTAAdd to Basket

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MNSILGLIDT VTNTIGKAQQ IELDKAALGQ QRELALQRIG LDRQALNNQV    50
EQFNKILEQR VQGPIQSVRL ARAAGFRVDP YSYTNQNFYD DQLNAIRLSY 100
KNLFKI 106
Length:106
Mass (Da):12,095
Last modified:December 1, 1992 - v1
Checksum:i6CC14546564D75E5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M86379 Genomic RNA. No translation available.
Z11536 Genomic RNA. Translation: CAA77638.1.
PIRiC43382.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M86379 Genomic RNA. No translation available.
Z11536 Genomic RNA. Translation: CAA77638.1 .
PIRi C43382.

3D structure databases

ProteinModelPortali P28711.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR007996. Vesivirus_VP2.
[Graphical view ]
Pfami PF05332. DUF743. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The complete nucleotide sequence of a feline calicivirus."
    Carter M.J., Milton I.D., Meanger J., Bennett M., Gaskell R.M., Turner P.C.
    Virology 190:443-448(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
  2. "Cloning and sequence determination of the feline calicivirus strain F9."
    Meanger J., Carter M.J., Gaskell R.M., Turner P.C.
    Biochem. Soc. Trans. 20:26S-26S(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
  3. "Identification and sequence determination of the capsid protein gene of feline calicivirus."
    Carter M.J., Milton I.D., Turner P.C., Meanger J., Bennett M., Gaskell R.M.
    Arch. Virol. 122:223-235(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
  4. "The mechanism of an exceptional case of reinitiation after translation of a long ORF reveals why such events do not generally occur in mammalian mRNA translation."
    Poyry T.A., Kaminski A., Connell E.J., Fraser C.S., Jackson R.J.
    Genes Dev. 21:3149-3162(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: EXPRESSION.

Entry informationi

Entry nameiVP2_FCVF9
AccessioniPrimary (citable) accession number: P28711
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 1992
Last sequence update: December 1, 1992
Last modified: November 13, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Miscellaneous

Translated by a ribosomal terminaition-reinitiation process from the bicistronic mRNA coding for VP1 and VP2.

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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