P28634 (YAEB_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
UPF0066 protein yaeB

Gene names

Name:	yaeB
Ordered Locus Names:	b0195, JW0191

Organism

Escherichia coli (strain K12)

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	235 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities	Belongs to the UPF0066 (virR) family.
Sequence caution	The sequence AAA24509.1 differs from that shown. Reason: Frameshift at several positions.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Binary interactions

With	Entry	#Exp.	IntAct	Notes
def	P0A6K3	1	EBI-1114692,EBI-548913

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 235	235	UPF0066 protein yaeB		PRO_0000155617

Sequences

	Sequence		Length	Mass (Da)
	P28634 [UniParc]. Last modified October 1, 1994. Version 2. Checksum: B19F8D50DECCB572	FASTA	235	26,362
	10 20 30 40 50 60 MSSFQFEQIG VIRSPYKEKF AVPRQPGLVK SANGELHLIA PYNQADAVRG LEAFSHLWIL 70 80 90 100 110 120 FVFHQTMEGG WRPTVRPPRL GGNARMGVFA TRSTFRPNPI GMSLVELKEV VCHKDSVILK 130 140 150 160 170 180 LGSLDLVDGT PVVDIKPYLP FAESLPDASA SYAQSAPAAE MAVSFTAEVE KQLLTLEKRY 190 200 210 220 230 PQLTLFIREV LAQDPRPAYR KGEETGKTYA VWLHDFNVRW RVTDAGFEVF ALEPR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	Miyamoto K. Submitted (APR-1993) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: K12.
[2]	"Identification, cloning, and characterization of rcsF, a new regulator gene for exopolysaccharide synthesis that suppresses the division mutation ftsZ84 in Escherichia coli K-12." Gervais F.G., Drapeau G.R. J. Bacteriol. 174:8016-8022(1992) [PubMed: 1459951] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: K12.
[3]	"Systematic sequencing of the Escherichia coli genome: analysis of the 4.0 - 6.0 min (189,987 - 281,416bp) region." Takemoto K., Mori H., Murayama N., Kataoka K., Yano M., Itoh T., Yamamoto Y., Inokuchi H., Miki T., Hatada E., Fukuda R., Ichihara S., Mizuno T., Makino K., Nakata A., Yura T., Sampei G., Mizobuchi K. Submitted (FEB-1996) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[4]	"Sequence of minutes 4-25 of Escherichia coli." Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M., Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D., Namath A., Oefner P., Roberts D., Schramm S., Davis R.W. Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[5]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed: 9278503] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[6]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed: 16738553] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Cross-references

Sequence databases
EMBL GenBank DDBJ	D15061 Genomic DNA. Translation: BAA03655.1. L04474 Genomic DNA. Translation: AAA24509.1. Frameshift. U70214 Genomic DNA. Translation: AAB08623.1. U00096 Genomic DNA. Translation: AAC73306.1. AP009048 Genomic DNA. Translation: BAA77871.1.
PIR	C47040. C64744.
RefSeq	NP_414737.1. NC_000913.2.
3D structure databases
ProteinModelPortal	P28634.
SMR	P28634. Positions 1-228.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-11195N.
IntAct	P28634. 5 interactions.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000000067; EBESCP00000000067; EBESCG00000000053. EBESCT00000015483; EBESCP00000014774; EBESCG00000014543.
GeneID	949112.
GenomeReviews	Gene locus JW0191 in contig AP009048_GR. Gene locus b0195 in contig U00096_GR.
KEGG	ecj:JW0191. eco:b0195.
PATRIC	32115503. VBIEscCol129921_0203.
Organism-specific databases
EchoBASE	EB1466.
EcoGene	EG11503. yaeB.
Phylogenomic databases
eggNOG	COG1720.
GeneTree	EBGT00050000011310.
HOGENOM	HBG419053.
OMA	SCFKEKF.
PhylomeDB	P28634.
ProtClustDB	CLSK879574.
Enzyme and pathway databases
BioCyc	EcoCyc:EG11503-MONOMER.
Gene expression databases
Genevestigator	P28634.
Family and domain databases
InterPro	IPR001378. UPF0066. IPR023368. UPF0066_cons_site. IPR023370. UPF0066_YaeB. [Graphical view]
Gene3D	G3DSA:2.40.30.70. G3DSA:2.40.30.70. 1 hit.
Pfam	PF01980. UPF0066. 1 hit. [Graphical view]
SUPFAM	SSF118196. SSF118196. 1 hit.
TIGRFAMs	TIGR00104. YaeB_AF0241. 1 hit.
PROSITE	PS01318. UPF0066. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

YAEB_ECOLI

Accession

Primary (citable) accession number: P28634
Secondary accession number(s): Q47676

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 1, 1992
Last sequence update:	October 1, 1994
Last modified:	January 25, 2012
This is version 82 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program