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Protein

Membrane-bound lysozyme inhibitor of C-type lysozyme

Gene

mliC

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Specifically inhibits C-type lysozymes.1 Publication

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sitei71Directly involved in lysozyme active site inhibitionBy similarity1
Sitei85Directly involved in lysozyme active site inhibitionBy similarity1

GO - Molecular functioni

  • lysozyme inhibitor activity Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:EG11488-MONOMER.
ECOL316407:JW1631-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Membrane-bound lysozyme inhibitor of C-type lysozyme1 Publication
Gene namesi
Name:mliC1 Publication
Synonyms:ydhA
Ordered Locus Names:b1639, JW1631
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11488. mliC.

Subcellular locationi

GO - Cellular componenti

  • cell outer membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell outer membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 17PROSITE-ProRule annotationAdd BLAST17
ChainiPRO_000016897418 – 109Membrane-bound lysozyme inhibitor of C-type lysozymeAdd BLAST92

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi18N-palmitoyl cysteinePROSITE-ProRule annotation1
Lipidationi18S-diacylglycerol cysteinePROSITE-ProRule annotation1
Disulfide bondi37 ↔ 1021 Publication

Keywords - PTMi

Disulfide bond, Lipoprotein, Palmitate

Proteomic databases

PaxDbiP28224.
PRIDEiP28224.

Interactioni

Subunit structurei

Monomer.1 Publication

Protein-protein interaction databases

BioGridi4263489. 136 interactors.
DIPiDIP-11726N.
IntActiP28224. 5 interactors.
STRINGi511145.b1639.

Structurei

Secondary structure

1109
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi38 – 40Combined sources3
Beta strandi44 – 46Combined sources3
Beta strandi50 – 66Combined sources17
Beta strandi70 – 76Combined sources7
Beta strandi81 – 84Combined sources4
Beta strandi86 – 92Combined sources7
Beta strandi97 – 100Combined sources4

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2F09NMR-A28-109[»]
ProteinModelPortaliP28224.
SMRiP28224.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP28224.

Family & Domainsi

Sequence similaritiesi

Belongs to the MliC family. Type 1 subfamily.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410642K. Bacteria.
COG3895. LUCA.
HOGENOMiHOG000272969.
InParanoidiP28224.
OMAiEYRCDEK.

Family and domain databases

InterProiIPR018660. C-type_lysozyme_inhibitor.
[Graphical view]
PfamiPF09864. MliC. 1 hit.
[Graphical view]
SUPFAMiSSF141488. SSF141488. 1 hit.
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P28224-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTMKKLLIII LPVLLSGCSA FNQLVERMQT DTLEYQCDEK PLTVKLNNPR
60 70 80 90 100
QEVSFVYDNQ LLHLKQGISA SGARYTDGIY VFWSKGDEAT VYKRDRIVLN

NCQLQNPQR
Length:109
Mass (Da):12,568
Last modified:November 1, 1997 - v2
Checksum:iFB6E5F97F6893224
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74711.2.
AP009048 Genomic DNA. Translation: BAA15400.2.
M92351 Genomic DNA. Translation: AAA24708.1.
PIRiA43261.
RefSeqiNP_416156.4. NC_000913.3.
WP_000178044.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74711; AAC74711; b1639.
BAA15400; BAA15400; BAA15400.
GeneIDi946811.
KEGGiecj:JW1631.
eco:b1639.
PATRICi32118580. VBIEscCol129921_1710.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74711.2.
AP009048 Genomic DNA. Translation: BAA15400.2.
M92351 Genomic DNA. Translation: AAA24708.1.
PIRiA43261.
RefSeqiNP_416156.4. NC_000913.3.
WP_000178044.1. NZ_LN832404.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2F09NMR-A28-109[»]
ProteinModelPortaliP28224.
SMRiP28224.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263489. 136 interactors.
DIPiDIP-11726N.
IntActiP28224. 5 interactors.
STRINGi511145.b1639.

Proteomic databases

PaxDbiP28224.
PRIDEiP28224.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74711; AAC74711; b1639.
BAA15400; BAA15400; BAA15400.
GeneIDi946811.
KEGGiecj:JW1631.
eco:b1639.
PATRICi32118580. VBIEscCol129921_1710.

Organism-specific databases

EchoBASEiEB1451.
EcoGeneiEG11488. mliC.

Phylogenomic databases

eggNOGiENOG410642K. Bacteria.
COG3895. LUCA.
HOGENOMiHOG000272969.
InParanoidiP28224.
OMAiEYRCDEK.

Enzyme and pathway databases

BioCyciEcoCyc:EG11488-MONOMER.
ECOL316407:JW1631-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP28224.
PROiP28224.

Family and domain databases

InterProiIPR018660. C-type_lysozyme_inhibitor.
[Graphical view]
PfamiPF09864. MliC. 1 hit.
[Graphical view]
SUPFAMiSSF141488. SSF141488. 1 hit.
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiMLIC_ECOLI
AccessioniPrimary (citable) accession number: P28224
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 1992
Last sequence update: November 1, 1997
Last modified: November 2, 2016
This is version 117 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.