P28223 (5HT2A_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 134.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: 5-hydroxytryptamine receptor 2A Short name=5-HT-2 Short name=5-HT-2A Alternative name(s): Serotonin receptor 2A | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 471 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. This receptor is involved in tracheal smooth muscle contraction, bronchoconstriction, and control of aldosterone production. |
| Subunit structure | Interacts with MPDZ and INADL. May interact with MPP3, PRDX6, DLG4, DLG1, CASK, APBA1 and MAGI2. Ref.11 Ref.12 |
| Subcellular location | Cell membrane; Multi-pass membrane protein By similarity. Note: Localizes to the postsynaptic thickening of axo-dendritic synapses By similarity. |
| Domain | The PDZ domain-binding motif is involved in the interaction with INADL, CASK, APBA1, DLG1 and DLG4. |
| Sequence similarities | Belongs to the G-protein coupled receptor 1 family. |
Ontologies
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: P28223-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: P28223-2) The sequence of this isoform differs from the canonical sequence as follows: 1-54: MDILCEENTS...WTVDSENRTN → MQFLKSAKQK...ISCVNPEDKW 55-138: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||
Molecule processing | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 471 | 471 | 5-hydroxytryptamine receptor 2A | PRO_0000068946 | |||||||
Regions | |||||||||||
| Topological domain | 1 – 75 | 75 | Extracellular By similarity | ||||||||
| Transmembrane | 76 – 99 | 24 | Helical; Name=1; By similarity | ||||||||
| Topological domain | 100 – 110 | 11 | Cytoplasmic By similarity | ||||||||
| Transmembrane | 111 – 132 | 22 | Helical; Name=2; By similarity | ||||||||
| Topological domain | 133 – 147 | 15 | Extracellular By similarity | ||||||||
| Transmembrane | 148 – 171 | 24 | Helical; Name=3; By similarity | ||||||||
| Topological domain | 172 – 191 | 20 | Cytoplasmic By similarity | ||||||||
| Transmembrane | 192 – 215 | 24 | Helical; Name=4; By similarity | ||||||||
| Topological domain | 216 – 233 | 18 | Extracellular By similarity | ||||||||
| Transmembrane | 234 – 254 | 21 | Helical; Name=5; By similarity | ||||||||
| Topological domain | 255 – 324 | 70 | Cytoplasmic By similarity | ||||||||
| Transmembrane | 325 – 346 | 22 | Helical; Name=6; By similarity | ||||||||
| Topological domain | 347 – 362 | 16 | Extracellular By similarity | ||||||||
| Transmembrane | 363 – 384 | 22 | Helical; Name=7; By similarity | ||||||||
| Topological domain | 385 – 471 | 87 | Cytoplasmic By similarity | ||||||||
| Motif | 469 – 471 | 3 | PDZ-binding | ||||||||
Amino acid modifications | |||||||||||
| Glycosylation | 8 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 38 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 44 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 51 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 54 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Disulfide bond | 148 ↔ 227 | By similarity | |||||||||
Natural variations | |||||||||||
| Alternative sequence | 1 – 54 | 54 | MDILC…ENRTN → MQFLKSAKQKPNYYHIMLVE DQEEGTLHQFNYCERCSESQ NNKCISCVNPEDKW in isoform 2. | VSP_044593 | |||||||
| Alternative sequence | 55 – 138 | 84 | Missing in isoform 2. | VSP_044594 | |||||||
| Natural variant | 25 | 1 | T → N. Ref.13 Ref.14 Corresponds to variant rs1805055 [ dbSNP | Ensembl ]. | VAR_003448 | |||||||
| Natural variant | 197 | 1 | I → V. Ref.15 Corresponds to variant rs6304 [ dbSNP | Ensembl ]. | VAR_013901 | |||||||
| Natural variant | 447 | 1 | A → V. Ref.15 Corresponds to variant rs6308 [ dbSNP | Ensembl ]. | VAR_013902 | |||||||
| Natural variant | 452 | 1 | H → Y. Ref.13 Ref.14 Ref.15 Corresponds to variant rs6314 [ dbSNP | Ensembl ]. | VAR_003449 | |||||||
Experimental info | |||||||||||
| Mutagenesis | 463 | 1 | G → V: Loss of interaction with INADL. Ref.12 | ||||||||
| Mutagenesis | 465 | 1 | N → S: No effect on interaction with INADL. Acquires the binding properties of HTR2C; when associated with S-470. Ref.12 | ||||||||
| Mutagenesis | 470 | 1 | C → S: No effect on interaction with INADL. Acquires the binding properties of HTR2C; when associated with S-465. Ref.12 | ||||||||
| Mutagenesis | 471 | 1 | V → A: Loss of interaction with INADL, CASK, APBA1, DLG1 and DLG4. Ref.12 | ||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Cloning of the human serotonin 5-HT2 and 5-HT1C receptor subtypes." Saltzman A.G., Morse B., Whitman M.M., Ivanshchenko Y., Jaye M., Felder S. Biochem. Biophys. Res. Commun. 181:1469-1478(1991) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). Tissue: Brain stem. |
| [2] | "The human 5-HT2 receptor is encoded by a multiple intron-exon gene." Chen K., Yang W., Grimsby J., Shih J.C. Brain Res. Mol. Brain Res. 14:20-26(1992) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [3] | "Primary structure of the human platelet serotonin 5-HT2A receptor: identify with frontal cortex serotonin 5-HT2A receptor." Cook E.H. Jr., Fletcher K.E., Wainwright M., Marks N., Yan S.Y., Leventhal B.L. J. Neurochem. 63:465-469(1994) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). |
| [4] | "cDNA clones of human proteins involved in signal transduction sequenced by the Guthrie cDNA resource center (www.cdna.org)." Puhl H.L. III, Ikeda S.R., Aronstam R.S. Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Brain. |
| [5] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2). Tissue: Testis and Thalamus. |
| [6] | "The DNA sequence and analysis of human chromosome 13." Dunham A., Matthews L.H., Burton J., Ashurst J.L., Howe K.L., Ashcroft K.J., Beare D.M., Burford D.C., Hunt S.E., Griffiths-Jones S., Jones M.C., Keenan S.J., Oliver K., Scott C.E., Ainscough R., Almeida J.P., Ambrose K.D., Andrews D.T. Ross M.T.Nature 428:522-528(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [7] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [8] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Lung. |
| [9] | "Cloning and nucleotide sequence of the human(5HT) type 2 receptor." Tritch R.J., Robinson D.L., Sahagan B.G., Horlick R.A. Submitted (MAY-1992) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 9-464 (ISOFORM 1). Tissue: Brain. |
| [10] | "Genomic organization, coding sequence and functional expression of human 5-HT2 and 5-HT1A receptor genes." Stam N.J., van Huizen F., van Alebeek C., Brands J., Dijkema R., Tonnaer J.A., Olijve W. Eur. J. Pharmacol. 227:153-162(1992) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 105-218. |
| [11] | "Interaction of serotonin 5-hydroxytryptamine type 2C receptors with PDZ10 of the multi-PDZ domain protein MUPP1." Becamel C., Figge A., Poliak S., Dumuis A., Peles E., Bockaert J., Luebbert H., Ullmer C. J. Biol. Chem. 276:12974-12982(2001) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH MPDZ. |
| [12] | "The serotonin 5-HT2A and 5-HT2C receptors interact with specific sets of PDZ proteins." Becamel C., Gavarini S., Chanrion B., Alonso G., Galeotti N., Dumuis A., Bockaert J., Marin P. J. Biol. Chem. 279:20257-20266(2004) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH INADL; MPP3; PRDX6; DLG4; DLG1; CASK; APBA1 AND MAGI2, MUTAGENESIS OF GLY-463; ASN-465; CYS-470 AND VAL-471. |
| [13] | "Systematic screening for mutations in the human serotonin-2A (5-HT2A) receptor gene: identification of two naturally occurring receptor variants and association analysis in schizophrenia." Erdmann J., Shimron-Abarbanell D., Rietschel M., Albus M., Maier W., Koerner J., Bondy B., Chen K., Shih J.C., Knapp M., Propping P., Noethen M.M. Hum. Genet. 97:614-619(1996) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS ASN-25 AND TYR-452. |
| [14] | "Unified approach to the analysis of genetic variation in serotonergic pathways." Marshall S.E., Bird T.G., Hart K., Welsh K.I. Am. J. Med. Genet. 88:621-627(1999) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS ASN-25 AND TYR-452. |
| [15] | "Characterization of single-nucleotide polymorphisms in coding regions of human genes." Cargill M., Altshuler D., Ireland J., Sklar P., Ardlie K., Patil N., Shaw N., Lane C.R., Lim E.P., Kalyanaraman N., Nemesh J., Ziaugra L., Friedland L., Rolfe A., Warrington J., Lipshutz R., Daley G.Q., Lander E.S. Nat. Genet. 22:231-238(1999) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS VAL-197; VAL-447 AND TYR-452. |
| [16] | Erratum Cargill M., Altshuler D., Ireland J., Sklar P., Ardlie K., Patil N., Shaw N., Lane C.R., Lim E.P., Kalyanaraman N., Nemesh J., Ziaugra L., Friedland L., Rolfe A., Warrington J., Lipshutz R., Daley G.Q., Lander E.S. Nat. Genet. 23:373-373(1999) |
| + | Additional computationally mapped references. |
Web resources
| SHMPD The Singapore human mutation and polymorphism database |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | X57830 mRNA. Translation: CAA40963.1. S42168, S42165, S42167 Genomic DNA. Translation: AAB22791.2. S71229 mRNA. Translation: AAB31320.1. AF498982 mRNA. Translation: AAM21129.1. AK302787 mRNA. Translation: BAG63991.1. AK314132 mRNA. Translation: BAG36822.1. AL160397, AL136958 Genomic DNA. Translation: CAI16877.1. AL136958, AL160397 Genomic DNA. Translation: CAI12227.1. CH471075 Genomic DNA. Translation: EAX08770.1. BC069356 mRNA. Translation: AAH69356.1. BC069576 mRNA. Translation: AAH69576.1. BC074848 mRNA. Translation: AAH74848.1. BC074849 mRNA. Translation: AAH74849.1. BC096839 mRNA. Translation: AAH96839.1. M86841 mRNA. Translation: AAA58354.1. S50130, S49737, S50113 Genomic DNA. Translation: AAB24166.2. |
| IPI | IPI00002185. IPI00942926. |
| PIR | A43956. |
| RefSeq | NP_000612.1. NM_000621.4. |
| UniGene | Hs.72630. |
3D structure databases | |
| ProteinModelPortal | P28223. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-41844N. |
| MINT | MINT-443877. |
| STRING | 9606.ENSP00000367959. |
Protein family/group databases | |
| GPCRDB | Search... |
PTM databases | |
| PhosphoSite | P28223. |
Polymorphism databases | |
| DMDM | 543727. |
Proteomic databases | |
| PaxDb | P28223. |
| PRIDE | P28223. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000378688; ENSP00000367959; ENSG00000102468. ENST00000542664; ENSP00000437737; ENSG00000102468. |
| GeneID | 3356. |
| KEGG | hsa:3356. |
| UCSC | uc010acr.3. human. |
Organism-specific databases | |
| CTD | 3356. |
| GeneCards | GC13M047407. |
| HGNC | HGNC:5293. HTR2A. |
| HPA | HPA014011. |
| MIM | 182135. gene. |
| neXtProt | NX_P28223. |
| PharmGKB | PA193. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG247243. |
| HOGENOM | HOG000240378. |
| HOVERGEN | HBG107487. |
| InParanoid | P28223. |
| KO | K04157. |
| OMA | FITNVMA. |
| OrthoDB | EOG4TMR24. |
| PhylomeDB | P28223. |
Enzyme and pathway databases | |
| Reactome | REACT_111102. Signal Transduction. |
Gene expression databases | |
| ArrayExpress | P28223. |
| Bgee | P28223. |
| CleanEx | HS_HTR2A. |
| Genevestigator | P28223. |
| GermOnline | ENSG00000102468. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR000455. 5HT2A_rcpt. IPR002231. 5HT_rcpt. IPR000276. GPCR_Rhodpsn. IPR017452. GPCR_Rhodpsn_7TM. [Graphical view] |
| Pfam | PF00001. 7tm_1. 1 hit. [Graphical view] |
| PRINTS | PR00516. 5HT2ARECEPTR. PR01101. 5HTRECEPTOR. PR00237. GPCRRHODOPSN. |
| PROSITE | PS00237. G_PROTEIN_RECEP_F1_1. 1 hit. PS50262. G_PROTEIN_RECEP_F1_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| BindingDB | P28223. |
| ChEMBL | CHEMBL224. |
| DrugBank | DB01238. Aripiprazole. DB00477. Chlorpromazine. DB01239. Chlorprothixene. DB00604. Cisapride. DB01242. Clomipramine. DB00363. Clozapine. DB00924. Cyclobenzaprine. DB00434. Cyproheptadine. DB00320. Dihydroergotamine. DB00843. Donepezil. DB00751. Epinastine. DB00696. Ergotamine. DB00176. Fluvoxamine. DB00933. Mesoridazine. DB00247. Methysergide. DB06148. Mianserin. DB00805. Minaprine. DB00370. Mirtazapine. DB01149. Nefazodone. DB00334. Olanzapine. DB01267. Paliperidone. DB00715. Paroxetine. DB00433. Prochlorperazine. DB00420. Promazine. DB01069. Promethazine. DB00777. Propiomazine. DB01224. Quetiapine. DB00734. Risperidone. DB06144. Sertindole. DB00372. Thiethylperazine. DB00679. Thioridazine. DB00752. Tranylcypromine. DB00656. Trazodone. DB00285. Venlafaxine. DB00246. Ziprasidone. |
| GenomeRNAi | 3356. |
| NextBio | 13270. |
| SOURCE | Search... |
Entry information
| Entry name | 5HT2A_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P28223 Secondary accession number(s): B2RAC5 Q5T8C0 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| 7-transmembrane G-linked receptors List of 7-transmembrane G-linked receptor entries |
| Human chromosome 13 Human chromosome 13: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
