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P27848 (YIGL_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 85. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Uncharacterized protein YigL
Gene names
Name:yigL
Ordered Locus Names:b3826, JW5854
OrganismEscherichia coli (strain K12)
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length266 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the HAD-like hydrolase superfamily. Cof family.

Sequence caution

The sequence AAA67622.1 differs from that shown. Reason: Frameshift at several positions.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 266266Uncharacterized protein YigL
PRO_0000054426

Sequences

Sequence LengthMass (Da)Tools
P27848 [UniParc].

Last modified October 11, 2004. Version 4.
Checksum: 7C9AFE9CF13D8B2B

FASTA26629,708
        10         20         30         40         50         60 
MYQVVASDLD GTLLSPDHTL SPYAKETLKL LTARGINFVF ATGRHHVDVG QIRDNLEIKS 

        70         80         90        100        110        120 
YMITSNGARV HDLDGNLIFA HNLDRDIASD LFGVVNDNPD IITNVYRDDE WFMNRHRPEE 

       130        140        150        160        170        180 
MRFFKEAVFQ YALYEPGLLE PEGVSKVFFT CDSHEQLLPL EQAINARWGD RVNVSFSTLT 

       190        200        210        220        230        240 
CLEVMAGGVS KGHALEAVAK KLGYSLKDCI AFGDGMNDAE MLSMAGKGCI MGSAHQRLKD 

       250        260 
LHPELEVIGT NADDAVPHYL RKLYLS 

« Hide

References

« Hide 'large scale' references
[1]"Analysis of the Escherichia coli genome: DNA sequence of the region from 84.5 to 86.5 minutes."
Daniels D.L., Plunkett G. III, Burland V.D., Blattner F.R.
Science 257:771-778(1992) [PubMed: 1379743] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[2]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1474(1997) [PubMed: 9278503] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[3]"Escherichia coli K-12: a cooperatively developed annotation snapshot -- 2005."
Riley M., Abe T., Arnaud M.B., Berlyn M.K.B., Blattner F.R., Chaudhuri R.R., Glasner J.D., Horiuchi T., Keseler I.M., Kosuge T., Mori H., Perna N.T., Plunkett G. III, Rudd K.E., Serres M.H., Thomas G.H., Thomson N.R., Wishart D., Wanner B.L.
Nucleic Acids Res. 34:1-9(2006) [PubMed: 16397293] [Abstract]
Cited for: SEQUENCE REVISION.
[4]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed: 16738553] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[5]"Nucleotide sequence of the pldB gene and characteristics of deduced amino acid sequence of lysophospholipase L2 in Escherichia coli."
Kobayashi T., Kudo I., Karasawa K., Mizushima H., Inoue K., Nojima S.
J. Biochem. 98:1017-1025(1985) [PubMed: 3908445] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-83.
Strain: K12 / KL16-99.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M87049 Genomic DNA. Translation: AAA67622.1. Frameshift.
U00096 Genomic DNA. Translation: AAT48225.1.
AP009048 Genomic DNA. Translation: BAE77475.1.
X03155 Genomic DNA. No translation available.
RefSeqYP_026267.1. NC_000913.2.

3D structure databases

ProteinModelPortalP27848.
SMRP27848. Positions 2-265.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000000513; EBESCP00000000513; EBESCG00000000431.
EBESCT00000016046; EBESCP00000015337; EBESCG00000015106.
GeneID2847768.
GenomeReviewsGene locus JW5854 in contig AP009048_GR.
Gene locus b3826 in contig U00096_GR.
KEGGecj:JW5854.
eco:b3826.
PATRIC32123153. VBIEscCol129921_3942.

Organism-specific databases

EchoBASEEB1438.
EcoGeneEG11470. yigL.

Phylogenomic databases

eggNOGCOG0561.
GeneTreeEBGT00050000009623.
HOGENOMHBG728500.
OMAQRFKFLM.
PhylomeDBP27848.
ProtClustDBPRK10976.

Enzyme and pathway databases

BioCycEcoCyc:EG11470-MONOMER.
MetaCyc:EG11470-MONOMER.

Gene expression databases

GenevestigatorP27848.

Family and domain databases

InterProIPR023214. HAD-like_dom.
IPR013200. HAD-SF_hydro-like_3.
IPR006379. HAD-SF_hydro_IIB.
IPR000150. Hypothet_cof.
[Graphical view]
Gene3DG3DSA:3.40.50.1000. HAD-like_dom. 2 hits.
KOK07024.
PfamPF08282. Hydrolase_3. 1 hit.
[Graphical view]
SUPFAMSSF56784. HAD-like_dom. 1 hit.
TIGRFAMsTIGR00099. Cof-subfamily. 1 hit.
TIGR01484. HAD-SF-IIB. 1 hit.
PROSITEPS01228. COF_1. 1 hit.
PS01229. COF_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameYIGL_ECOLI
AccessionPrimary (citable) accession number: P27848
Secondary accession number(s): P76763, Q2M8D1, Q6BEY9
Entry history
Integrated into UniProtKB/Swiss-Prot: August 1, 1992
Last sequence update: October 11, 2004
Last modified: January 25, 2012
This is version 85 of the entry and version 4 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene

SIMILARITY comments

Index of protein domains and families