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P27787 (FER1_MAIZE) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 104. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ferredoxin-1, chloroplastic
Alternative name(s):
Ferredoxin I
Short name=Fd I
Gene names
Name:FDX1
Synonyms:PFD1
OrganismZea mays (Maize)
Taxonomic identifier4577 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeZea

Protein attributes

Sequence length150 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.

Cofactor

Binds 1 2Fe-2S cluster.

Subcellular location

Plastidchloroplast.

Sequence similarities

Belongs to the 2Fe2S plant-type ferredoxin family.

Contains 1 2Fe-2S ferredoxin-type domain.

Ontologies

Keywords
   Biological processElectron transport
Transport
   Cellular componentChloroplast
Plastid
   DomainTransit peptide
   Ligand2Fe-2S
Iron
Iron-sulfur
Metal-binding
   Technical term3D-structure
Gene Ontology (GO)
   Biological_processelectron transport chain

Inferred from electronic annotation. Source: InterPro

   Cellular_componentchloroplast

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_function2 iron, 2 sulfur cluster binding

Inferred from electronic annotation. Source: UniProtKB-KW

electron carrier activity

Inferred from electronic annotation. Source: InterPro

metal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Transit peptide1 – 5252Chloroplast By similarity
Chain53 – 15098Ferredoxin-1, chloroplastic
PRO_0000008830

Regions

Domain55 – 145912Fe-2S ferredoxin-type

Sites

Metal binding911Iron-sulfur (2Fe-2S)
Metal binding961Iron-sulfur (2Fe-2S)
Metal binding991Iron-sulfur (2Fe-2S)
Metal binding1291Iron-sulfur (2Fe-2S)

Secondary structure

..................... 150
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P27787 [UniParc].

Last modified August 1, 1992. Version 1.
Checksum: 1AF43354A9BC1D3F

FASTA15015,838
        10         20         30         40         50         60 
MATVLGSPRA PAFFFSSSSL RAAPAPTAVA LPAAKVGIMG RSASSRRRLR AQATYNVKLI 

        70         80         90        100        110        120 
TPEGEVELQV PDDVYILDQA EEDGIDLPYS CRAGSCSSCA GKVVSGSVDQ SDQSYLDDGQ 

       130        140        150 
IADGWVLTCH AYPTSDVVIE THKEEELTGA 

« Hide

References

[1]"Molecular cloning and differential expression of the maize ferredoxin gene family."
Hase T., Kimatsa Y., Yonekura K., Matsumura T., Sakakibara H.
Plant Physiol. 96:77-83(1991) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
[2]"Structure of the electron transfer complex between ferredoxin and ferredoxin-NADP+ reductase."
Kurisu G., Kusunoki M., Katoh E., Yamazaki T., Teshima K., Onda Y., Kimata-Ariga Y., Hase T.
Nat. Struct. Biol. 8:117-121(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.6 ANGSTROMS).
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M73829 mRNA. Translation: AAA33459.1.
M73830 mRNA. Translation: AAA33460.1.
PIRT03286.
RefSeqNP_001105345.1. NM_001111875.1.
UniGeneZm.2.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1GAQX-ray2.59B53-150[»]
3B2FX-ray1.70A/B53-150[»]
3W5UX-ray2.70B/D/F/H53-150[»]
3W5VX-ray3.81B/D53-150[»]
ProteinModelPortalP27787.
SMRP27787. Positions 53-150.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActP27787. 1 interaction.

Proteomic databases

ProMEXP27787.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID542275.
KEGGzma:542275.

Organism-specific databases

GrameneP27787.
MaizeGDB66392.

Phylogenomic databases

HOGENOMHOG000217152.
KOK02639.

Family and domain databases

Gene3D3.10.20.30. 1 hit.
InterProIPR001041. 2Fe-2S_ferredoxin-type.
IPR006058. 2Fe2S_fd_BS.
IPR012675. Beta-grasp_dom.
IPR010241. Fd_pln.
[Graphical view]
PfamPF00111. Fer2. 1 hit.
[Graphical view]
SUPFAMSSF54292. SSF54292. 1 hit.
TIGRFAMsTIGR02008. fdx_plant. 1 hit.
PROSITEPS00197. 2FE2S_FER_1. 1 hit.
PS51085. 2FE2S_FER_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceP27787.

Entry information

Entry nameFER1_MAIZE
AccessionPrimary (citable) accession number: P27787
Entry history
Integrated into UniProtKB/Swiss-Prot: August 1, 1992
Last sequence update: August 1, 1992
Last modified: July 9, 2014
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references