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P27787

- FER1_MAIZE

UniProt

P27787 - FER1_MAIZE

Protein

Ferredoxin-1, chloroplastic

Gene

FDX1

Organism
Zea mays (Maize)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.

    Cofactori

    Binds 1 2Fe-2S cluster.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi91 – 911Iron-sulfur (2Fe-2S)
    Metal bindingi96 – 961Iron-sulfur (2Fe-2S)
    Metal bindingi99 – 991Iron-sulfur (2Fe-2S)
    Metal bindingi129 – 1291Iron-sulfur (2Fe-2S)

    GO - Molecular functioni

    1. 2 iron, 2 sulfur cluster binding Source: UniProtKB-KW
    2. electron carrier activity Source: InterPro
    3. metal ion binding Source: UniProtKB-KW

    GO - Biological processi

    1. electron transport chain Source: InterPro

    Keywords - Biological processi

    Electron transport, Transport

    Keywords - Ligandi

    2Fe-2S, Iron, Iron-sulfur, Metal-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ferredoxin-1, chloroplastic
    Alternative name(s):
    Ferredoxin I
    Short name:
    Fd I
    Gene namesi
    Name:FDX1
    Synonyms:PFD1
    OrganismiZea mays (Maize)
    Taxonomic identifieri4577 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeZea

    Organism-specific databases

    GrameneiP27787.
    MaizeGDBi66392.

    Subcellular locationi

    GO - Cellular componenti

    1. chloroplast Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Chloroplast, Plastid

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transit peptidei1 – 5252ChloroplastBy similarityAdd
    BLAST
    Chaini53 – 15098Ferredoxin-1, chloroplasticPRO_0000008830Add
    BLAST

    Proteomic databases

    ProMEXiP27787.

    Interactioni

    Protein-protein interaction databases

    IntActiP27787. 1 interaction.

    Structurei

    Secondary structure

    1
    150
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi54 – 618
    Beta strandi64 – 718
    Beta strandi72 – 743
    Helixi76 – 827
    Beta strandi90 – 945
    Beta strandi100 – 1067
    Helixi118 – 1225
    Beta strandi125 – 1273
    Helixi128 – 1303
    Beta strandi132 – 1409
    Helixi144 – 1474

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1GAQX-ray2.59B53-150[»]
    3B2FX-ray1.70A/B53-150[»]
    3W5UX-ray2.70B/D/F/H53-150[»]
    3W5VX-ray3.81B/D53-150[»]
    ProteinModelPortaliP27787.
    SMRiP27787. Positions 53-150.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP27787.

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini55 – 145912Fe-2S ferredoxin-typePROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the 2Fe2S plant-type ferredoxin family.Curated
    Contains 1 2Fe-2S ferredoxin-type domain.PROSITE-ProRule annotation

    Keywords - Domaini

    Transit peptide

    Phylogenomic databases

    HOGENOMiHOG000217152.
    KOiK02639.

    Family and domain databases

    Gene3Di3.10.20.30. 1 hit.
    InterProiIPR001041. 2Fe-2S_ferredoxin-type.
    IPR006058. 2Fe2S_fd_BS.
    IPR012675. Beta-grasp_dom.
    IPR010241. Fd_pln.
    [Graphical view]
    PfamiPF00111. Fer2. 1 hit.
    [Graphical view]
    SUPFAMiSSF54292. SSF54292. 1 hit.
    TIGRFAMsiTIGR02008. fdx_plant. 1 hit.
    PROSITEiPS00197. 2FE2S_FER_1. 1 hit.
    PS51085. 2FE2S_FER_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P27787-1 [UniParc]FASTAAdd to Basket

    « Hide

    MATVLGSPRA PAFFFSSSSL RAAPAPTAVA LPAAKVGIMG RSASSRRRLR    50
    AQATYNVKLI TPEGEVELQV PDDVYILDQA EEDGIDLPYS CRAGSCSSCA 100
    GKVVSGSVDQ SDQSYLDDGQ IADGWVLTCH AYPTSDVVIE THKEEELTGA 150
    Length:150
    Mass (Da):15,838
    Last modified:August 1, 1992 - v1
    Checksum:i1AF43354A9BC1D3F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M73829 mRNA. Translation: AAA33459.1.
    M73830 mRNA. Translation: AAA33460.1.
    PIRiT03286.
    RefSeqiNP_001105345.1. NM_001111875.1.
    UniGeneiZm.2.

    Genome annotation databases

    GeneIDi542275.
    KEGGizma:542275.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M73829 mRNA. Translation: AAA33459.1 .
    M73830 mRNA. Translation: AAA33460.1 .
    PIRi T03286.
    RefSeqi NP_001105345.1. NM_001111875.1.
    UniGenei Zm.2.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1GAQ X-ray 2.59 B 53-150 [» ]
    3B2F X-ray 1.70 A/B 53-150 [» ]
    3W5U X-ray 2.70 B/D/F/H 53-150 [» ]
    3W5V X-ray 3.81 B/D 53-150 [» ]
    ProteinModelPortali P27787.
    SMRi P27787. Positions 53-150.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi P27787. 1 interaction.

    Proteomic databases

    ProMEXi P27787.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 542275.
    KEGGi zma:542275.

    Organism-specific databases

    Gramenei P27787.
    MaizeGDBi 66392.

    Phylogenomic databases

    HOGENOMi HOG000217152.
    KOi K02639.

    Miscellaneous databases

    EvolutionaryTracei P27787.

    Family and domain databases

    Gene3Di 3.10.20.30. 1 hit.
    InterProi IPR001041. 2Fe-2S_ferredoxin-type.
    IPR006058. 2Fe2S_fd_BS.
    IPR012675. Beta-grasp_dom.
    IPR010241. Fd_pln.
    [Graphical view ]
    Pfami PF00111. Fer2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54292. SSF54292. 1 hit.
    TIGRFAMsi TIGR02008. fdx_plant. 1 hit.
    PROSITEi PS00197. 2FE2S_FER_1. 1 hit.
    PS51085. 2FE2S_FER_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Molecular cloning and differential expression of the maize ferredoxin gene family."
      Hase T., Kimatsa Y., Yonekura K., Matsumura T., Sakakibara H.
      Plant Physiol. 96:77-83(1991) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    2. "Structure of the electron transfer complex between ferredoxin and ferredoxin-NADP+ reductase."
      Kurisu G., Kusunoki M., Katoh E., Yamazaki T., Teshima K., Onda Y., Kimata-Ariga Y., Hase T.
      Nat. Struct. Biol. 8:117-121(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.6 ANGSTROMS).

    Entry informationi

    Entry nameiFER1_MAIZE
    AccessioniPrimary (citable) accession number: P27787
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 1, 1992
    Last sequence update: August 1, 1992
    Last modified: October 1, 2014
    This is version 105 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3