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P27412

- VP2_RHDVF

UniProt

P27412 - VP2_RHDVF

Protein

Protein VP2

Gene

ORF2

Organism
Rabbit hemorrhagic disease virus (strain Rabbit/Germany/FRG/1989) (Ra/LV/RHDV/GH/1989/GE) (RHDV-FRG)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Minor structural protein present in one or two copies per virion. Does not seem to play a role in capsid assembly, but is essential for production of infectious virus By similarity.By similarity

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein VP2
    Alternative name(s):
    Minor capsid protein
    Gene namesi
    ORF Names:ORF2
    OrganismiRabbit hemorrhagic disease virus (strain Rabbit/Germany/FRG/1989) (Ra/LV/RHDV/GH/1989/GE) (RHDV-FRG)
    Taxonomic identifieri314536 [NCBI]
    Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageCaliciviridaeLagovirus
    Virus hostiOryctolagus cuniculus (Rabbit) [TaxID: 9986]
    ProteomesiUP000000413: Genome

    Subcellular locationi

    Virion. Host cytoplasm By similarity

    GO - Cellular componenti

    1. host cell cytoplasm Source: UniProtKB-SubCell
    2. virion Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Host cytoplasm, Virion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 117117Protein VP2PRO_0000100128Add
    BLAST

    Interactioni

    Subunit structurei

    May interact with capsid protein.By similarity

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the lagovirus VP2 protein family.Curated

    Family and domain databases

    InterProiIPR008558. Lagovirus_RHDV_Vp2.
    [Graphical view]
    PfamiPF05801. DUF840. 1 hit.
    [Graphical view]
    ProDomiPD009258. DUF840_lagovir. 1 hit.
    [Graphical view] [Entries sharing at least one domain]

    Sequencei

    Sequence statusi: Complete.

    P27412-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAFLMSEFIG LGLAGAGVLS NALLRRQELQ LQKQAMENGL VLKADQLGRL    50
    GFNPNEVKNV IVGNSFSSNV RLSNMHNDAS VVNAYNVYNP ASNGIRKKIK 100
    SLNNSVKIYN TTGESSV 117
    Length:117
    Mass (Da):12,670
    Last modified:August 1, 1992 - v1
    Checksum:i838811B8CAB21C46
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M67473 Genomic RNA. Translation: AAA47286.1.
    PIRiB41039. VCWWRH.
    RefSeqiNP_062876.1. NC_001543.1.

    Genome annotation databases

    GeneIDi1491967.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M67473 Genomic RNA. Translation: AAA47286.1 .
    PIRi B41039. VCWWRH.
    RefSeqi NP_062876.1. NC_001543.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 1491967.

    Family and domain databases

    InterProi IPR008558. Lagovirus_RHDV_Vp2.
    [Graphical view ]
    Pfami PF05801. DUF840. 1 hit.
    [Graphical view ]
    ProDomi PD009258. DUF840_lagovir. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    ProtoNeti Search...

    Publicationsi

    1. "Rabbit hemorrhagic disease virus -- molecular cloning and nucleotide sequencing of a calicivirus genome."
      Meyers G., Wirblich C., Thiel H.-J.
      Virology 184:664-676(1991) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

    Entry informationi

    Entry nameiVP2_RHDVF
    AccessioniPrimary (citable) accession number: P27412
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 1, 1992
    Last sequence update: August 1, 1992
    Last modified: October 1, 2014
    This is version 43 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Translated by a ribosomal terminaition-reinitiation process from the bicistronic mRNA coding for VP1 and VP2.

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3