SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

P27412

- VP2_RHDVF

UniProt

P27412 - VP2_RHDVF

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Protein VP2
Gene
ORF2
Organism
Rabbit hemorrhagic disease virus (strain Rabbit/Germany/FRG/1989) (Ra/LV/RHDV/GH/1989/GE) (RHDV-FRG)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Minor structural protein present in one or two copies per virion. Does not seem to play a role in capsid assembly, but is essential for production of infectious virus By similarity.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein VP2
Alternative name(s):
Minor capsid protein
Gene namesi
ORF Names:ORF2
OrganismiRabbit hemorrhagic disease virus (strain Rabbit/Germany/FRG/1989) (Ra/LV/RHDV/GH/1989/GE) (RHDV-FRG)
Taxonomic identifieri314536 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageCaliciviridaeLagovirus
Virus hostiOryctolagus cuniculus (Rabbit) [TaxID: 9986]
ProteomesiUP000000413: Genome

Subcellular locationi

Virion. Host cytoplasm By similarity

GO - Cellular componenti

  1. host cell cytoplasm Source: UniProtKB-SubCell
  2. virion Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Host cytoplasm, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 117117Protein VP2
PRO_0000100128Add
BLAST

Interactioni

Subunit structurei

May interact with capsid protein By similarity.

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR008558. Lagovirus_RHDV_Vp2.
[Graphical view]
PfamiPF05801. DUF840. 1 hit.
[Graphical view]
ProDomiPD009258. DUF840_lagovir. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P27412-1 [UniParc]FASTAAdd to Basket

« Hide

MAFLMSEFIG LGLAGAGVLS NALLRRQELQ LQKQAMENGL VLKADQLGRL    50
GFNPNEVKNV IVGNSFSSNV RLSNMHNDAS VVNAYNVYNP ASNGIRKKIK 100
SLNNSVKIYN TTGESSV 117
Length:117
Mass (Da):12,670
Last modified:August 1, 1992 - v1
Checksum:i838811B8CAB21C46
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M67473 Genomic RNA. Translation: AAA47286.1.
PIRiB41039. VCWWRH.
RefSeqiNP_062876.1. NC_001543.1.

Genome annotation databases

GeneIDi1491967.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M67473 Genomic RNA. Translation: AAA47286.1 .
PIRi B41039. VCWWRH.
RefSeqi NP_062876.1. NC_001543.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 1491967.

Family and domain databases

InterProi IPR008558. Lagovirus_RHDV_Vp2.
[Graphical view ]
Pfami PF05801. DUF840. 1 hit.
[Graphical view ]
ProDomi PD009258. DUF840_lagovir. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
ProtoNeti Search...

Publicationsi

  1. "Rabbit hemorrhagic disease virus -- molecular cloning and nucleotide sequencing of a calicivirus genome."
    Meyers G., Wirblich C., Thiel H.-J.
    Virology 184:664-676(1991) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiVP2_RHDVF
AccessioniPrimary (citable) accession number: P27412
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 1, 1992
Last sequence update: August 1, 1992
Last modified: May 29, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Miscellaneous

Translated by a ribosomal terminaition-reinitiation process from the bicistronic mRNA coding for VP1 and VP2.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi