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P27372

- NDHL_SYNY3

UniProt

P27372 - NDHL_SYNY3

Protein

NAD(P)H-quinone oxidoreductase subunit L

Gene

ndhL

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at protein leveli
  1. Functioni

    NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient By similarity. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.By similarity1 Publication

    Catalytic activityi

    NAD(P)H + plastoquinone = NAD(P)+ + plastoquinol.

    GO - Molecular functioni

    1. oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor Source: UniProtKB-HAMAP
    2. quinone binding Source: UniProtKB-KW

    GO - Biological processi

    1. transport Source: UniProtKB-KW

    Keywords - Molecular functioni

    Oxidoreductase

    Keywords - Biological processi

    Transport

    Keywords - Ligandi

    NAD, NADP, Plastoquinone

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    NAD(P)H-quinone oxidoreductase subunit L (EC:1.6.5.-)
    Alternative name(s):
    Inorganic carbon transport protein
    NAD(P)H dehydrogenase I subunit L
    NDH-1 subunit L
    NDH-L
    Gene namesi
    Name:ndhL
    Synonyms:ictA
    Ordered Locus Names:ssr1386
    OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
    Taxonomic identifieri1111708 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
    ProteomesiUP000001425: Chromosome

    Subcellular locationi

    Cellular thylakoid membrane 1 Publication; Multi-pass membrane protein 1 Publication

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. thylakoid membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Membrane, Thylakoid

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 8080NAD(P)H-quinone oxidoreductase subunit LPRO_0000084150Add
    BLAST

    Keywords - PTMi

    Quinone

    Interactioni

    Subunit structurei

    NDH-1 can be composed of about 15 different subunits; different subcomplexes with different compositions have been identified which probably have different functions.1 Publication

    Protein-protein interaction databases

    IntActiP27372. 7 interactions.
    STRINGi1148.ssr1386.

    Structurei

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei14 – 3421HelicalSequence AnalysisAdd
    BLAST
    Transmembranei51 – 7121HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the complex I NdhL subunit family.Curated

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG268505.
    HOGENOMiHOG000022604.
    KOiK05583.
    OMAiLLFYWMN.
    OrthoDBiEOG6Q2SSH.

    Family and domain databases

    HAMAPiMF_01355. NDH1_NDH1L.
    InterProiIPR019654. NADH-quinone_OxRdatse_su_L.
    [Graphical view]
    PfamiPF10716. NdhL. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P27372-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEDLLGLLLS ETGLLAIIYL GLSLAYLLVF PALLYWYLQK RWYVASSVER   50
    LVMYFLVFLF FPGLLVLSPV LNLRPRRQAA 80
    Length:80
    Mass (Da):9,252
    Last modified:August 1, 1992 - v1
    Checksum:i311AD10FA3B6136D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M73833 Genomic DNA. Translation: AAA27290.1.
    BA000022 Genomic DNA. Translation: BAA18123.1.
    PIRiJQ1959.
    RefSeqiNP_441443.1. NC_000911.1.
    YP_005651501.1. NC_017277.1.
    YP_007451325.1. NC_020286.1.

    Genome annotation databases

    EnsemblBacteriaiBAA18123; BAA18123; BAA18123.
    GeneIDi954803.
    KEGGisyn:ssr1386.
    syy:SYNGTS_1548.
    syz:MYO_115610.
    PATRICi23840291. VBISynSp132158_1705.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M73833 Genomic DNA. Translation: AAA27290.1 .
    BA000022 Genomic DNA. Translation: BAA18123.1 .
    PIRi JQ1959.
    RefSeqi NP_441443.1. NC_000911.1.
    YP_005651501.1. NC_017277.1.
    YP_007451325.1. NC_020286.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi P27372. 7 interactions.
    STRINGi 1148.ssr1386.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAA18123 ; BAA18123 ; BAA18123 .
    GeneIDi 954803.
    KEGGi syn:ssr1386.
    syy:SYNGTS_1548.
    syz:MYO_115610.
    PATRICi 23840291. VBISynSp132158_1705.

    Phylogenomic databases

    eggNOGi NOG268505.
    HOGENOMi HOG000022604.
    KOi K05583.
    OMAi LLFYWMN.
    OrthoDBi EOG6Q2SSH.

    Family and domain databases

    HAMAPi MF_01355. NDH1_NDH1L.
    InterProi IPR019654. NADH-quinone_OxRdatse_su_L.
    [Graphical view ]
    Pfami PF10716. NdhL. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Cloning and inactivation of a gene essential to inorganic carbon transport of Synechocystis PCC6803."
      Ogawa T.
      Plant Physiol. 96:280-284(1991) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION IN INORGANIC CARBON TRANSPORT.
    2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
      Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
      , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 6803 / Kazusa.
    3. "Identification of NdhL and Ssl1690 (NdhO) in NDH-1L and NDH-1M complexes of Synechocystis sp. PCC 6803."
      Battchikova N., Zhang P., Rudd S., Ogawa T., Aro E.-M.
      J. Biol. Chem. 280:2587-2595(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: PROTEIN SEQUENCE OF 42-50, SUBUNIT.
    4. "Identification and characterization of the ictA/ndhL gene product essential to inorganic carbon transport of Synechocystis PCC6803."
      Ogawa T.
      Plant Physiol. 99:1604-1608(1992) [PubMed] [Europe PMC] [Abstract]
      Cited for: CHARACTERIZATION AS A MEMBER OF THE NAD(P)H-QUINONE OXIDOREDUCTASE COMPLEX, SUBCELLULAR LOCATION.

    Entry informationi

    Entry nameiNDHL_SYNY3
    AccessioniPrimary (citable) accession number: P27372
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 1, 1992
    Last sequence update: August 1, 1992
    Last modified: October 1, 2014
    This is version 79 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Direct protein sequencing, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families
    2. Synechocystis PCC 6803
      Synechocystis (strain PCC 6803): entries and gene names

    External Data

    Dasty 3