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P27317 (NCAP_CCHFV) Reviewed, UniProtKB/Swiss-Prot

Last modified October 16, 2013. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Nucleoprotein
Alternative name(s):
Nucleocapsid protein
Short name=Protein N
Gene names
Name:N
OrganismCrimean-Congo hemorrhagic fever virus (isolate C68031) (CCHFV)
Taxonomic identifier11594 [NCBI]
Taxonomic lineageVirusesssRNA negative-strand virusesBunyaviridaeNairovirus
Virus hostBos taurus (Bovine) [TaxID: 9913]
Capra hircus (Goat) [TaxID: 9925]
Homo sapiens (Human) [TaxID: 9606]
Hyalomma [TaxID: 34625]
Ovis aries (Sheep) [TaxID: 9940]
Rhipicephalus microplus (Cattle tick) (Boophilus microplus) [TaxID: 6941]

Protein attributes

Sequence length482 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Virion. Note: Internal protein of virus particle.

Sequence similarities

Belongs to the nairovirus nucleocapsid protein family.

Ontologies

Keywords
   Cellular componentCapsid protein
Helical capsid protein
Virion
   LigandRNA-binding
Viral nucleoprotein
   Molecular functionRibonucleoprotein
Gene Ontology (GO)
   Cellular_componenthelical viral capsid

Inferred from electronic annotation. Source: UniProtKB-KW

ribonucleoprotein complex

Inferred from electronic annotation. Source: UniProtKB-KW

viral nucleocapsid

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 482482Nucleoprotein
PRO_0000222006

Sequences

Sequence LengthMass (Da)Tools
P27317 [UniParc].

Last modified August 1, 1992. Version 1.
Checksum: 171F8D9438F00FA2

FASTA48253,966
        10         20         30         40         50         60 
MENKIEVNNK DEMNKWFEEF KKGNGLVDTF TNPYSFCESV PNLERFVFQM ASATDDAQKD 

        70         80         90        100        110        120 
SIYASALVEA TKFCAPIYEC AWVSSTGIVK KGLEWFEKNA GTIKSWDESY IELKVEVPKI 

       130        140        150        160        170        180 
EQLANYQQAA LKWRKDIGFR VNANTAALSH KVLAEYKVPG EIVMSVKEML SDMIRRRNLI 

       190        200        210        220        230        240 
LNRGGDENPR GPVSREHVEW CREFVKGKYI MAFNPPWGDI NKSGRSGIAL VATGLAKLAE 

       250        260        270        280        290        300 
TEGKGVFDEA KKTVEALNGY LDKHKDEVDK ASADNMITNL LKHIAKAQEL YKNSSALRAQ 

       310        320        330        340        350        360 
GAQIDTAFSS YYWLYKAGVT PETFPTVSQF LFELGKQPRG TKKMKKALLS TPMKWGKKLY 

       370        380        390        400        410        420 
ELFADDSFQQ NRIYMHPAVL TAGRISEMGV CFGTIPVANP DDAAQGSGHT KSILNLRTNT 

       430        440        450        460        470        480 
ETNNPCAKTI VKLFEIQKTG FNIQDMDIVA SEHLLHQSLV GKQSPFQNAY NVKGNATSAN 


II 

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References

[1]"Comparison of the S RNA segments and nucleoprotein sequences of Crimean-Congo hemorrhagic fever, Hazara, and Dugbe viruses."
Marriott A.C., Nuttall P.A.
Virology 189:795-799(1992) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M86625 Genomic RNA. Translation: AAA42888.1.
PIRVHVUCH. B42990.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR003486. Nairo_nucleocap.
[Graphical view]
PfamPF02477. Nairo_nucleo. 1 hit.
[Graphical view]
PIRSFPIRSF003950. N_NairoV. 1 hit.
ProtoNetSearch...

Entry information

Entry nameNCAP_CCHFV
AccessionPrimary (citable) accession number: P27317
Entry history
Integrated into UniProtKB/Swiss-Prot: August 1, 1992
Last sequence update: August 1, 1992
Last modified: October 16, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families