Reviewed,
UniProtKB/Swiss-Prot P27128 (RFAI_ECOLI)
Last modified
June 16, 2009.
Version 70.
History...
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Lipopolysaccharide 1,3-galactosyltransferase EC=2.4.1.44 Alternative name(s): Lipopolysaccharide 3-alpha-galactosyltransferase | ||||||
| Gene names |
| ||||||
| Organism | Escherichia coli (strain K12) [Complete proteome] [HAMAP] | ||||||
| Taxonomic identifier | 83333 [NCBI] | ||||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia |
Protein attributes
| Sequence length | 339 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Catalytic activity | UDP-galactose + lipopolysaccharide = UDP + 3-alpha-D-galactosyl-[lipopolysaccharide glucose]. |
| Pathway | |
| Sequence similarities | Belongs to the glycosyltransferase 8 family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Lipopolysaccharide biosynthesis |
| Molecular function | Glycosyltransferase Transferase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | lipopolysaccharide biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | lipopolysaccharide 3-alpha-galactosyltransferase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 339 | 339 | Lipopolysaccharide 1,3-galactosyltransferase | PRO_0000206064 | |||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Structures of the rfaB, rfaI, rfaJ, and rfaS genes of Escherichia coli K-12 and their roles in assembly of the lipopolysaccharide core." Pradel E., Parker C.T., Schnaitman C.A. J. Bacteriol. 174:4736-4745(1992) [PubMed: 1624461] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: K12. |
| [2] | "Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes." Sofia H.J., Burland V., Daniels D.L., Plunkett G. III, Blattner F.R. Nucleic Acids Res. 22:2576-2586(1994) [PubMed: 8041620] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076. |
| [3] | "The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed: 9278503] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076. |
| [4] | "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed: 16738553] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911. |
Cross-references
Sequence databases | |
|---|---|
| M80599 Genomic DNA. Translation: AAA24086.1. U00039 Genomic DNA. Translation: AAB18604.1. U00096 Genomic DNA. Translation: AAC76651.1. AP009048 Genomic DNA. Translation: BAE77665.1. | |
| PIR | C42982. |
| RefSeq | AP_004164.1. NP_418084.1. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP:10670N. |
Protein family/group databases | |
| CAZy | GT8. Glycosyltransferase Family 8. |
Genome annotation databases | |
| GeneID | 948143. |
| GenomeReviews | Gene locus JW3602 in contig AP009048_GR. Gene locus b3627 in contig U00096_GR. |
| KEGG | ecj:JW3602. eco:b3627. |
Organism-specific databases | |
| EchoBASE | EB1327. |
| EcoGene | EG11352. rfaI. |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | P27128. |
| OMA | P27128. MLADKAV. |
Enzyme and pathway databases | |
| BioCyc | EcoCyc:EG11352-MON. MetaCyc:EG11352-MON. |
Family and domain databases | |
| InterPro | IPR002495. Glyco_trans_8. IPR013645. Glyco_transf_8N. [Graphical view] |
| Pfam | PF01501. Glyco_transf_8. 1 hit. PF08437. Glyco_transf_8N. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | RFAI_ECOLI | ||||||||
| Accession | Primary (citable) accession number: P27128 Secondary accession number(s): Q2M7U1 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| Escherichia coli Escherichia coli (strain K12): entries and cross-references to EcoGene |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

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