Reviewed,
UniProtKB/Swiss-Prot P27030 (RHAB_SALTY)
Last modified
June 16, 2009.
Version 56.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Rhamnulokinase EC=2.7.1.5 Alternative name(s): Rhamnulose kinase | ||||
| Gene names |
| ||||
| Organism | Salmonella typhimurium [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 90371 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Salmonella |
Protein attributes
| Sequence length | 489 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Catalytic activity | ATP + L-rhamnulose = ADP + L-rhamnulose 1-phosphate. HAMAP MF_01535 |
| Pathway | Carbohydrate degradation; L-rhamnose degradation; glycerone phosphate from L-rhamnose: step 2/3. HAMAP MF_01535 |
| Sequence similarities | Belongs to the rhamnulokinase family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Rhamnose metabolism |
| Ligand | ATP-binding Nucleotide-binding |
| Molecular function | Kinase Transferase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | rhamnose catabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | ATP binding Inferred from electronic annotation. Source: UniProtKB-KW rhamnulokinase activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 489 | 489 | Rhamnulokinase HAMAP MF_01535 | PRO_0000090545 | |||||
Regions | |||||||||
| Region | 236 – 238 | 3 | Substrate binding By similarity | ||||||
Sites | |||||||||
| Binding site | 14 | 1 | ATP By similarity | ||||||
| Binding site | 259 | 1 | ATP By similarity | ||||||
| Binding site | 296 | 1 | Substrate By similarity | ||||||
| Binding site | 304 | 1 | ATP By similarity | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Cloning and characterization of the L-rhamnose regulon in Salmonella typhimurium LT2." Nishitani J., Wilcox G. Gene 105:37-42(1991) [PubMed: 1657713] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: LT2. |
| [2] | "Complete genome sequence of Salmonella enterica serovar Typhimurium LT2." McClelland M., Sanderson K.E., Spieth J., Clifton S.W., Latreille P., Courtney L., Porwollik S., Ali J., Dante M., Du F., Hou S., Layman D., Leonard S., Nguyen C., Scott K., Holmes A., Grewal N., Mulvaney E. Wilson R.K.Nature 413:852-856(2001) [PubMed: 11677609] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: LT2 / SGSC1412 / ATCC 700720. |
Cross-references
Sequence databases | |
|---|---|
| X57299 Genomic DNA. Translation: CAA40557.1. AE008889 Genomic DNA. Translation: AAL22887.1. | |
| PIR | JQ1289. |
| RefSeq | NP_462928.1. |
3D structure databases | |
| SMR | P27030. Positions 2-476. |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 1255574. |
| GenomeReviews | Gene locus STM4047 in contig AE006468_GR. |
| KEGG | stm:STM4047. |
| NMPDR | fig|99287.1.peg.3901. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | P27030. |
| OMA | P27030. EIHRFKN. |
Enzyme and pathway databases | |
| BioCyc | STYP99287:STM4047-MON. |
| BRENDA | 2.7.1.5. 2. |
Family and domain databases | |
| HAMAP | MF_01535. [Tree] |
| InterPro | IPR000577. Carb_kinase_FGGY. IPR018484. Carb_kinase_FGGY_N. IPR013449. Rhamnulokinase. [Graphical view] |
| PANTHER | PTHR10196. FGGY_kin. 1 hit. |
| Pfam | PF00370. FGGY_N. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR02627. rhamnulo_kin. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | RHAB_SALTY | ||||||||
| Accession | Primary (citable) accession number: P27030 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with


