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P26987

- SAM22_SOYBN

UniProt

P26987 - SAM22_SOYBN

Protein

Stress-induced protein SAM22

Gene
N/A
Organism
Glycine max (Soybean) (Glycine hispida)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Biological processi

    1. defense response Source: UniProtKB-KW
    2. response to biotic stimulus Source: UniProtKB-KW

    Keywords - Molecular functioni

    Pathogenesis-related protein

    Keywords - Biological processi

    Plant defense

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Stress-induced protein SAM22
    Alternative name(s):
    Starvation-associated message 22
    Allergen: Gly m 4
    OrganismiGlycine max (Soybean) (Glycine hispida)
    Taxonomic identifieri3847 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
    ProteomesiUP000008827: Chromosome 7

    Pathology & Biotechi

    Allergenic propertiesi

    Causes an allergic reaction in human. Gly m 4 is the major soy allergen for patients allergic to birch pollen with soy allergy.1 Publication

    Keywords - Diseasei

    Allergen

    Protein family/group databases

    Allergomei3297. Gly m 4.0101.
    749. Gly m 4.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 158158Stress-induced protein SAM22PRO_0000154170Add
    BLAST

    Proteomic databases

    PRIDEiP26987.
    ProMEXiP26987.

    Expressioni

    Gene expression databases

    GenevestigatoriP26987.

    Structurei

    Secondary structure

    1
    158
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi3 – 1412
    Helixi16 – 249
    Helixi27 – 348
    Beta strandi38 – 4912
    Beta strandi53 – 608
    Beta strandi63 – 7513
    Turni76 – 794
    Beta strandi80 – 889
    Beta strandi93 – 964
    Beta strandi98 – 1036
    Beta strandi110 – 12112
    Beta strandi123 – 1253
    Helixi130 – 15324

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2K7HNMR-A2-158[»]
    ProteinModelPortaliP26987.
    SMRiP26987. Positions 2-158.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP26987.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the BetVI family.Curated

    Family and domain databases

    Gene3Di3.30.530.20. 1 hit.
    InterProiIPR024949. Bet_v_I_allergen.
    IPR000916. Bet_v_I_dom.
    IPR023393. START-like_dom.
    [Graphical view]
    PfamiPF00407. Bet_v_1. 1 hit.
    [Graphical view]
    PRINTSiPR00634. BETALLERGEN.
    PROSITEiPS00451. PATHOGENESIS_BETVI. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P26987-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGVFTFEDEI NSPVAPATLY KALVTDADNV IPKALDSFKS VENVEGNGGP    50
    GTIKKITFLE DGETKFVLHK IESIDEANLG YSYSVVGGAA LPDTAEKITF 100
    DSKLVAGPNG GSAGKLTVKY ETKGDAEPNQ DELKTGKAKA DALFKAIEAY 150
    LLAHPDYN 158
    Length:158
    Mass (Da):16,772
    Last modified:August 1, 1992 - v1
    Checksum:i9FA5167221DC929C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X60043 mRNA. Translation: CAA42646.1.
    PIRiS20518.
    RefSeqiNP_001236038.1. NM_001249109.2.
    XP_006582821.1. XM_006582758.1.
    UniGeneiGma.36245.
    Gma.3926.

    Genome annotation databases

    EnsemblPlantsiGLYMA07G37240.2; GLYMA07G37240.2; GLYMA07G37240.
    GeneIDi100101844.
    547915.
    KEGGigmx:100101844.
    gmx:547915.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X60043 mRNA. Translation: CAA42646.1 .
    PIRi S20518.
    RefSeqi NP_001236038.1. NM_001249109.2.
    XP_006582821.1. XM_006582758.1.
    UniGenei Gma.36245.
    Gma.3926.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2K7H NMR - A 2-158 [» ]
    ProteinModelPortali P26987.
    SMRi P26987. Positions 2-158.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    Allergomei 3297. Gly m 4.0101.
    749. Gly m 4.

    Proteomic databases

    PRIDEi P26987.
    ProMEXi P26987.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi GLYMA07G37240.2 ; GLYMA07G37240.2 ; GLYMA07G37240 .
    GeneIDi 100101844.
    547915.
    KEGGi gmx:100101844.
    gmx:547915.

    Miscellaneous databases

    EvolutionaryTracei P26987.

    Gene expression databases

    Genevestigatori P26987.

    Family and domain databases

    Gene3Di 3.30.530.20. 1 hit.
    InterProi IPR024949. Bet_v_I_allergen.
    IPR000916. Bet_v_I_dom.
    IPR023393. START-like_dom.
    [Graphical view ]
    Pfami PF00407. Bet_v_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00634. BETALLERGEN.
    PROSITEi PS00451. PATHOGENESIS_BETVI. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Characterization of a stress-induced, developmentally regulated gene family from soybean."
      Crowell D., John M.E., Russell D., Amasino R.M.
      Plant Mol. Biol. 18:459-466(1992) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: cv. Mandarin.
    2. "Soybean allergy in patients allergic to birch pollen: clinical investigation and molecular characterization of allergens."
      Mittag D., Vieths S., Vogel L., Becker W.M., Rihs H.P., Helbling A., Wuthrich B., Ballmer-Weber B.K.
      J. Allergy Clin. Immunol. 113:148-154(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: ALLERGEN.

    Entry informationi

    Entry nameiSAM22_SOYBN
    AccessioniPrimary (citable) accession number: P26987
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 1, 1992
    Last sequence update: August 1, 1992
    Last modified: October 1, 2014
    This is version 76 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. Allergens
      Nomenclature of allergens and list of entries
    2. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3