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P26987 (SAM22_SOYBN) Reviewed, UniProtKB/Swiss-Prot

Last modified March 19, 2014. Version 73. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Stress-induced protein SAM22
Alternative name(s):
Starvation-associated message 22
Allergen=Gly m 4
OrganismGlycine max (Soybean) (Glycine hispida) [Reference proteome]
Taxonomic identifier3847 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycine

Protein attributes

Sequence length158 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Allergenic properties

Causes an allergic reaction in human. Gly m 4 is the major soy allergen for patients allergic to birch pollen with soy allergy. Ref.2

Sequence similarities

Belongs to the BetVI family.

Ontologies

Keywords
   Biological processPlant defense
   DiseaseAllergen
   Molecular functionPathogenesis-related protein
   Technical term3D-structure
Complete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processdefense response

Inferred from electronic annotation. Source: UniProtKB-KW

response to biotic stimulus

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 158158Stress-induced protein SAM22
PRO_0000154170

Secondary structure

......................... 158
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P26987 [UniParc].

Last modified August 1, 1992. Version 1.
Checksum: 9FA5167221DC929C

FASTA15816,772
        10         20         30         40         50         60 
MGVFTFEDEI NSPVAPATLY KALVTDADNV IPKALDSFKS VENVEGNGGP GTIKKITFLE 

        70         80         90        100        110        120 
DGETKFVLHK IESIDEANLG YSYSVVGGAA LPDTAEKITF DSKLVAGPNG GSAGKLTVKY 

       130        140        150 
ETKGDAEPNQ DELKTGKAKA DALFKAIEAY LLAHPDYN 

« Hide

References

[1]"Characterization of a stress-induced, developmentally regulated gene family from soybean."
Crowell D., John M.E., Russell D., Amasino R.M.
Plant Mol. Biol. 18:459-466(1992) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Strain: cv. Mandarin.
[2]"Soybean allergy in patients allergic to birch pollen: clinical investigation and molecular characterization of allergens."
Mittag D., Vieths S., Vogel L., Becker W.M., Rihs H.P., Helbling A., Wuthrich B., Ballmer-Weber B.K.
J. Allergy Clin. Immunol. 113:148-154(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: ALLERGEN.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X60043 mRNA. Translation: CAA42646.1.
PIRS20518.
RefSeqNP_001236038.1. NM_001249109.2.
XP_006582821.1. XM_006582758.1.
UniGeneGma.3926.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2K7HNMR-A2-158[»]
ProteinModelPortalP26987.
SMRP26987. Positions 2-158.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

Allergome3297. Gly m 4.0101.
749. Gly m 4.

Proteomic databases

PRIDEP26987.
ProMEXP26987.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsGLYMA07G37240.2; GLYMA07G37240.2; GLYMA07G37240.
GeneID100101844.
547915.
KEGGgmx:547915.

Gene expression databases

GenevestigatorP26987.

Family and domain databases

Gene3D3.30.530.20. 1 hit.
InterProIPR024949. Bet_v_I_allergen.
IPR000916. Bet_v_I_dom.
IPR023393. START-like_dom.
[Graphical view]
PfamPF00407. Bet_v_1. 1 hit.
[Graphical view]
PRINTSPR00634. BETALLERGEN.
PROSITEPS00451. PATHOGENESIS_BETVI. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceP26987.

Entry information

Entry nameSAM22_SOYBN
AccessionPrimary (citable) accession number: P26987
Entry history
Integrated into UniProtKB/Swiss-Prot: August 1, 1992
Last sequence update: August 1, 1992
Last modified: March 19, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

Allergens

Nomenclature of allergens and list of entries