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Protein

Stress-induced protein SAM22

Gene
N/A
Organism
Glycine max (Soybean) (Glycine hispida)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  1. defense response Source: UniProtKB-KW
  2. response to biotic stimulus Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Pathogenesis-related protein

Keywords - Biological processi

Plant defense

Names & Taxonomyi

Protein namesi
Recommended name:
Stress-induced protein SAM22
Alternative name(s):
Starvation-associated message 22
Allergen: Gly m 4
OrganismiGlycine max (Soybean) (Glycine hispida)
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
ProteomesiUP000008827 Componenti: Chromosome 7

Pathology & Biotechi

Allergenic propertiesi

Causes an allergic reaction in human. Gly m 4 is the major soy allergen for patients allergic to birch pollen with soy allergy.1 Publication

Keywords - Diseasei

Allergen

Protein family/group databases

Allergomei3297. Gly m 4.0101.
749. Gly m 4.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 158158Stress-induced protein SAM22PRO_0000154170Add
BLAST

Proteomic databases

PRIDEiP26987.
ProMEXiP26987.

Expressioni

Gene expression databases

GenevestigatoriP26987.

Structurei

Secondary structure

1
158
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi3 – 1412Combined sources
Helixi16 – 249Combined sources
Helixi27 – 348Combined sources
Beta strandi38 – 4912Combined sources
Beta strandi53 – 608Combined sources
Beta strandi63 – 7513Combined sources
Turni76 – 794Combined sources
Beta strandi80 – 889Combined sources
Beta strandi93 – 964Combined sources
Beta strandi98 – 1036Combined sources
Beta strandi110 – 12112Combined sources
Beta strandi123 – 1253Combined sources
Helixi130 – 15324Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2K7HNMR-A2-158[»]
ProteinModelPortaliP26987.
SMRiP26987. Positions 2-158.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP26987.

Family & Domainsi

Sequence similaritiesi

Belongs to the BetVI family.Curated

Phylogenomic databases

InParanoidiP26987.

Family and domain databases

Gene3Di3.30.530.20. 1 hit.
InterProiIPR024949. Bet_v_I_allergen.
IPR000916. Bet_v_I_dom.
IPR023393. START-like_dom.
[Graphical view]
PfamiPF00407. Bet_v_1. 1 hit.
[Graphical view]
PRINTSiPR00634. BETALLERGEN.
PROSITEiPS00451. PATHOGENESIS_BETVI. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P26987-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGVFTFEDEI NSPVAPATLY KALVTDADNV IPKALDSFKS VENVEGNGGP
60 70 80 90 100
GTIKKITFLE DGETKFVLHK IESIDEANLG YSYSVVGGAA LPDTAEKITF
110 120 130 140 150
DSKLVAGPNG GSAGKLTVKY ETKGDAEPNQ DELKTGKAKA DALFKAIEAY

LLAHPDYN
Length:158
Mass (Da):16,772
Last modified:July 31, 1992 - v1
Checksum:i9FA5167221DC929C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X60043 mRNA. Translation: CAA42646.1.
PIRiS20518.
RefSeqiNP_001236038.1. NM_001249109.2.
XP_006582821.1. XM_006582758.1.
UniGeneiGma.36245.
Gma.3926.

Genome annotation databases

EnsemblPlantsiGLYMA07G37240.2; GLYMA07G37240.2; GLYMA07G37240.
GeneIDi100101844.
547915.
KEGGigmx:100101844.
gmx:547915.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X60043 mRNA. Translation: CAA42646.1.
PIRiS20518.
RefSeqiNP_001236038.1. NM_001249109.2.
XP_006582821.1. XM_006582758.1.
UniGeneiGma.36245.
Gma.3926.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2K7HNMR-A2-158[»]
ProteinModelPortaliP26987.
SMRiP26987. Positions 2-158.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

Allergomei3297. Gly m 4.0101.
749. Gly m 4.

Proteomic databases

PRIDEiP26987.
ProMEXiP26987.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiGLYMA07G37240.2; GLYMA07G37240.2; GLYMA07G37240.
GeneIDi100101844.
547915.
KEGGigmx:100101844.
gmx:547915.

Phylogenomic databases

InParanoidiP26987.

Miscellaneous databases

EvolutionaryTraceiP26987.

Gene expression databases

GenevestigatoriP26987.

Family and domain databases

Gene3Di3.30.530.20. 1 hit.
InterProiIPR024949. Bet_v_I_allergen.
IPR000916. Bet_v_I_dom.
IPR023393. START-like_dom.
[Graphical view]
PfamiPF00407. Bet_v_1. 1 hit.
[Graphical view]
PRINTSiPR00634. BETALLERGEN.
PROSITEiPS00451. PATHOGENESIS_BETVI. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Characterization of a stress-induced, developmentally regulated gene family from soybean."
    Crowell D., John M.E., Russell D., Amasino R.M.
    Plant Mol. Biol. 18:459-466(1991) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Mandarin.
  2. "Soybean allergy in patients allergic to birch pollen: clinical investigation and molecular characterization of allergens."
    Mittag D., Vieths S., Vogel L., Becker W.M., Rihs H.P., Helbling A., Wuthrich B., Ballmer-Weber B.K.
    J. Allergy Clin. Immunol. 113:148-154(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: ALLERGEN.

Entry informationi

Entry nameiSAM22_SOYBN
AccessioniPrimary (citable) accession number: P26987
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 31, 1992
Last sequence update: July 31, 1992
Last modified: January 6, 2015
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Allergens
    Nomenclature of allergens and list of entries
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.