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P26987

- SAM22_SOYBN

UniProt

P26987 - SAM22_SOYBN

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Protein

Stress-induced protein SAM22

Gene
N/A
Organism
Glycine max (Soybean) (Glycine hispida)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Biological processi

  1. defense response Source: UniProtKB-KW
  2. response to biotic stimulus Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Pathogenesis-related protein

Keywords - Biological processi

Plant defense

Names & Taxonomyi

Protein namesi
Recommended name:
Stress-induced protein SAM22
Alternative name(s):
Starvation-associated message 22
Allergen: Gly m 4
OrganismiGlycine max (Soybean) (Glycine hispida)
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
ProteomesiUP000008827: Chromosome 7

Pathology & Biotechi

Allergenic propertiesi

Causes an allergic reaction in human. Gly m 4 is the major soy allergen for patients allergic to birch pollen with soy allergy.1 Publication

Keywords - Diseasei

Allergen

Protein family/group databases

Allergomei3297. Gly m 4.0101.
749. Gly m 4.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 158158Stress-induced protein SAM22PRO_0000154170Add
BLAST

Proteomic databases

PRIDEiP26987.
ProMEXiP26987.

Expressioni

Gene expression databases

GenevestigatoriP26987.

Structurei

Secondary structure

1
158
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi3 – 1412
Helixi16 – 249
Helixi27 – 348
Beta strandi38 – 4912
Beta strandi53 – 608
Beta strandi63 – 7513
Turni76 – 794
Beta strandi80 – 889
Beta strandi93 – 964
Beta strandi98 – 1036
Beta strandi110 – 12112
Beta strandi123 – 1253
Helixi130 – 15324

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2K7HNMR-A2-158[»]
ProteinModelPortaliP26987.
SMRiP26987. Positions 2-158.

Miscellaneous databases

EvolutionaryTraceiP26987.

Family & Domainsi

Sequence similaritiesi

Belongs to the BetVI family.

Family and domain databases

Gene3Di3.30.530.20. 1 hit.
InterProiIPR024949. Bet_v_I_allergen.
IPR000916. Bet_v_I_dom.
IPR023393. START-like_dom.
[Graphical view]
PfamiPF00407. Bet_v_1. 1 hit.
[Graphical view]
PRINTSiPR00634. BETALLERGEN.
PROSITEiPS00451. PATHOGENESIS_BETVI. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P26987-1 [UniParc]FASTAAdd to Basket

« Hide

MGVFTFEDEI NSPVAPATLY KALVTDADNV IPKALDSFKS VENVEGNGGP    50
GTIKKITFLE DGETKFVLHK IESIDEANLG YSYSVVGGAA LPDTAEKITF 100
DSKLVAGPNG GSAGKLTVKY ETKGDAEPNQ DELKTGKAKA DALFKAIEAY 150
LLAHPDYN 158
Length:158
Mass (Da):16,772
Last modified:August 1, 1992 - v1
Checksum:i9FA5167221DC929C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X60043 mRNA. Translation: CAA42646.1.
PIRiS20518.
RefSeqiNP_001236038.1. NM_001249109.2.
XP_006582821.1. XM_006582758.1.
UniGeneiGma.36245.
Gma.3926.

Genome annotation databases

EnsemblPlantsiGLYMA07G37240.2; GLYMA07G37240.2; GLYMA07G37240.
GeneIDi100101844.
547915.
KEGGigmx:100101844.
gmx:547915.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X60043 mRNA. Translation: CAA42646.1 .
PIRi S20518.
RefSeqi NP_001236038.1. NM_001249109.2.
XP_006582821.1. XM_006582758.1.
UniGenei Gma.36245.
Gma.3926.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2K7H NMR - A 2-158 [» ]
ProteinModelPortali P26987.
SMRi P26987. Positions 2-158.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

Allergomei 3297. Gly m 4.0101.
749. Gly m 4.

Proteomic databases

PRIDEi P26987.
ProMEXi P26987.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi GLYMA07G37240.2 ; GLYMA07G37240.2 ; GLYMA07G37240 .
GeneIDi 100101844.
547915.
KEGGi gmx:100101844.
gmx:547915.

Miscellaneous databases

EvolutionaryTracei P26987.

Gene expression databases

Genevestigatori P26987.

Family and domain databases

Gene3Di 3.30.530.20. 1 hit.
InterProi IPR024949. Bet_v_I_allergen.
IPR000916. Bet_v_I_dom.
IPR023393. START-like_dom.
[Graphical view ]
Pfami PF00407. Bet_v_1. 1 hit.
[Graphical view ]
PRINTSi PR00634. BETALLERGEN.
PROSITEi PS00451. PATHOGENESIS_BETVI. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Characterization of a stress-induced, developmentally regulated gene family from soybean."
    Crowell D., John M.E., Russell D., Amasino R.M.
    Plant Mol. Biol. 18:459-466(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Mandarin.
  2. "Soybean allergy in patients allergic to birch pollen: clinical investigation and molecular characterization of allergens."
    Mittag D., Vieths S., Vogel L., Becker W.M., Rihs H.P., Helbling A., Wuthrich B., Ballmer-Weber B.K.
    J. Allergy Clin. Immunol. 113:148-154(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: ALLERGEN.

Entry informationi

Entry nameiSAM22_SOYBN
AccessioniPrimary (citable) accession number: P26987
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 1, 1992
Last sequence update: August 1, 1992
Last modified: June 11, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Allergens
    Nomenclature of allergens and list of entries
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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