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Protein

Ribulose bisphosphate carboxylase small chain 2C, chloroplastic

Gene

RBCS-2C

Organism
Solanum tuberosum (Potato)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity).By similarity

Catalytic activityi

2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O.
3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Lyase, Monooxygenase, Oxidoreductase

Keywords - Biological processi

Calvin cycle, Carbon dioxide fixation, Photorespiration, Photosynthesis

Names & Taxonomyi

Protein namesi
Recommended name:
Ribulose bisphosphate carboxylase small chain 2C, chloroplastic (EC:4.1.1.39)
Short name:
RuBisCO small subunit 2C
Gene namesi
Name:RBCS-2C
OrganismiSolanum tuberosum (Potato)
Taxonomic identifieri4113 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanum
Proteomesi
  • UP000011115 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 57ChloroplastBy similarityAdd BLAST57
ChainiPRO_000003155458 – 180Ribulose bisphosphate carboxylase small chain 2C, chloroplasticAdd BLAST123

Expressioni

Gene expression databases

ExpressionAtlasiP26577. baseline.

Interactioni

Subunit structurei

8 large chains + 8 small chains.

Protein-protein interaction databases

STRINGi4113.PGSC0003DMT400032975.

Structurei

3D structure databases

ProteinModelPortaliP26577.
SMRiP26577.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO small chain family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiENOG410IM2H. Eukaryota.
COG4451. LUCA.
InParanoidiP26577.
KOiK01602.
OMAiYREHGNS.
OrthoDBiEOG09360OM1.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR024681. RuBisCO_sc.
IPR000894. RuBisCO_sc_dom.
IPR024680. RuBisCO_ssu_N.
[Graphical view]
PfamiPF12338. RbcS. 1 hit.
PF00101. RuBisCO_small. 1 hit.
[Graphical view]
PRINTSiPR00152. RUBISCOSMALL.
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P26577-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASSVMSSAA VATRGNGAQA SMVAPFTGLK STASFPVSRK QNLDITSIAS
60 70 80 90 100
NGGRVRCMQV WPPINMKKYE TLSYLPDLSD EQLLKEVEYL LKNGWVPCLE
110 120 130 140 150
FETEHGFVYR ENNKSPGYYD GRYWTMWKLP MFGCTDATQV LAEVEEAKKA
160 170 180
YPQAWIRIIG FDNVRQVQCI SFIAYKPEGY
Length:180
Mass (Da):20,319
Last modified:August 1, 1992 - v1
Checksum:i2B549F5DA94A29BE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X69762 Genomic DNA. Translation: CAA49416.1.
PIRiE31083. RKPO2C.
RefSeqiXP_006363111.1. XM_006363049.2.
XP_006363112.1. XM_006363050.2.
UniGeneiStu.444.

Genome annotation databases

EnsemblPlantsiPGSC0003DMT400032975; PGSC0003DMT400032975; PGSC0003DMG400012666.
PGSC0003DMT400032976; PGSC0003DMT400032976; PGSC0003DMG400012666.
PGSC0003DMT400032978; PGSC0003DMT400032978; PGSC0003DMG400012666.
GeneIDi102600888.
102601229.
GrameneiPGSC0003DMT400032975; PGSC0003DMT400032975; PGSC0003DMG400012666.
PGSC0003DMT400032976; PGSC0003DMT400032976; PGSC0003DMG400012666.
PGSC0003DMT400032978; PGSC0003DMT400032978; PGSC0003DMG400012666.
KEGGisot:102600888.
sot:102601229.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X69762 Genomic DNA. Translation: CAA49416.1.
PIRiE31083. RKPO2C.
RefSeqiXP_006363111.1. XM_006363049.2.
XP_006363112.1. XM_006363050.2.
UniGeneiStu.444.

3D structure databases

ProteinModelPortaliP26577.
SMRiP26577.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4113.PGSC0003DMT400032975.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiPGSC0003DMT400032975; PGSC0003DMT400032975; PGSC0003DMG400012666.
PGSC0003DMT400032976; PGSC0003DMT400032976; PGSC0003DMG400012666.
PGSC0003DMT400032978; PGSC0003DMT400032978; PGSC0003DMG400012666.
GeneIDi102600888.
102601229.
GrameneiPGSC0003DMT400032975; PGSC0003DMT400032975; PGSC0003DMG400012666.
PGSC0003DMT400032976; PGSC0003DMT400032976; PGSC0003DMG400012666.
PGSC0003DMT400032978; PGSC0003DMT400032978; PGSC0003DMG400012666.
KEGGisot:102600888.
sot:102601229.

Phylogenomic databases

eggNOGiENOG410IM2H. Eukaryota.
COG4451. LUCA.
InParanoidiP26577.
KOiK01602.
OMAiYREHGNS.
OrthoDBiEOG09360OM1.

Gene expression databases

ExpressionAtlasiP26577. baseline.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR024681. RuBisCO_sc.
IPR000894. RuBisCO_sc_dom.
IPR024680. RuBisCO_ssu_N.
[Graphical view]
PfamiPF12338. RbcS. 1 hit.
PF00101. RuBisCO_small. 1 hit.
[Graphical view]
PRINTSiPR00152. RUBISCOSMALL.
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRBSC_SOLTU
AccessioniPrimary (citable) accession number: P26577
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 1, 1992
Last sequence update: August 1, 1992
Last modified: November 30, 2016
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.