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P26533 (ATPE_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 106. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
ATP synthase epsilon chain
Alternative name(s):
ATP synthase F1 sector epsilon subunit
F-ATPase epsilon subunit
Gene names
Name:atpC
Synonyms:atpE
Ordered Locus Names:slr1330
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length136 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Produces ATP from ADP in the presence of a proton gradient across the membrane. HAMAP-Rule MF_00530

Subunit structure

F-type ATPases have 2 components, CF1 - the catalytic core - and CF0 - the membrane proton channel. CF1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. CF0 has three main subunits: a, b and c.

Subcellular location

Cellular thylakoid membrane; Peripheral membrane protein By similarity HAMAP-Rule MF_00530.

Sequence similarities

Belongs to the ATPase epsilon chain family.

Sequence caution

The sequence BAA18088.1 differs from that shown. Reason: Erroneous initiation.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed Ref.3
Chain2 – 136135ATP synthase epsilon chain HAMAP-Rule MF_00530
PRO_0000188230

Sequences

Sequence LengthMass (Da)Tools
P26533 [UniParc].

Last modified January 23, 2007. Version 3.
Checksum: 55B8F3545DC23E72

FASTA13614,581
        10         20         30         40         50         60 
MTLTVRVITP DKVVWDEEVQ ELILPSTTGQ LGILSNHAPL LTALEIGVMR VRPGKDWQNI 

        70         80         90        100        110        120 
AVMGGFAEVE NNEVKVLVNG AELGTTIDAE SARQAYTAAQ GALEEANRGE DKPNQLKASN 

       130 
NYKKARARLQ AAGGAV 

« Hide

References

« Hide 'large scale' references
[1]"The atp1 and atp2 operons of the cyanobacterium Synechocystis sp. PCC 6803."
Lill H., Nelson N.
Plant Mol. Biol. 17:641-652(1991) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.
[3]"Towards a proteome project of cyanobacterium Synechocystis sp. strain PCC6803: linking 130 protein spots with their respective genes."
Sazuka T., Ohara O.
Electrophoresis 18:1252-1258(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: PROTEIN SEQUENCE OF 2-21.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X58129 Genomic DNA. Translation: CAA41138.1.
BA000022 Genomic DNA. Translation: BAA18088.1. Different initiation.
PIRS75527.
RefSeqNP_441408.2. NC_000911.1.
YP_005651466.1. NC_017277.1.
YP_007451290.1. NC_020286.1.

3D structure databases

ProteinModelPortalP26533.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActP26533. 7 interactions.
STRING1148.slr1330.

Proteomic databases

PaxDbP26533.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA18088; BAA18088; BAA18088.
GeneID954764.
KEGGsyn:slr1330.
syy:SYNGTS_1513.
syz:MYO_115260.
PATRIC23840213. VBISynSp132158_1666.

Phylogenomic databases

eggNOGCOG0355.
HOGENOMHOG000216024.
KOK02114.
OMAGILTGHA.
OrthoDBEOG690MN9.
PhylomeDBP26533.

Family and domain databases

Gene3D2.60.15.10. 1 hit.
HAMAPMF_00530. ATP_synth_epsil_bac.
InterProIPR001469. ATPase_F1-cplx_dsu/esu.
IPR020546. ATPase_F1-cplx_dsu/esu_N.
IPR020547. ATPase_F1_dsu/esu_C.
[Graphical view]
PANTHERPTHR13822. PTHR13822. 1 hit.
PfamPF00401. ATP-synt_DE. 1 hit.
PF02823. ATP-synt_DE_N. 1 hit.
[Graphical view]
ProDomPD000944. ATPase_F1-cplx_dsu/esu. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF51344. SSF51344. 1 hit.
TIGRFAMsTIGR01216. ATP_synt_epsi. 1 hit.
ProtoNetSearch...

Entry information

Entry nameATPE_SYNY3
AccessionPrimary (citable) accession number: P26533
Entry history
Integrated into UniProtKB/Swiss-Prot: August 1, 1992
Last sequence update: January 23, 2007
Last modified: July 9, 2014
This is version 106 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names

SIMILARITY comments

Index of protein domains and families