Reviewed,
UniProtKB/Swiss-Prot P26439 (3BHS2_HUMAN)
Last modified
July 7, 2009.
Version 102.
History...
Clusters with 100%,
90%,
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Documents (7) |
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Names and origin
| Protein names | Recommended name: 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 Alternative name(s): 3-beta-HSD II Including the following 2 domains: 1- Recommended name: 3-beta-hydroxy-Delta(5)-steroid dehydrogenase EC=1.1.1.145 Alternative name(s): 3-beta-hydroxy-5-ene steroid dehydrogenase Progesterone reductase 2- Recommended name: Steroid Delta-isomerase EC=5.3.3.1 Alternative name(s): Delta-5-3-ketosteroid isomerase | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Complete proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 372 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | 3-beta-HSD is a bifunctional enzyme, that catalyzes the oxidative conversion of Delta(5)-ene-3-beta-hydroxy steroid, and the oxidative conversion of ketosteroids. The 3-beta-HSD enzymatic system plays a crucial role in the biosynthesis of all classes of hormonal steroids. |
| Catalytic activity | A 3-beta-hydroxy-Delta(5)-steroid + NAD+ = a 3-oxo-Delta(5)-steroid + NADH. A 3-oxo-Delta(5)-steroid = a 3-oxo-Delta(4)-steroid. |
| Pathway | |
| Subcellular location | Endoplasmic reticulum membrane; Single-pass membrane protein. Mitochondrion membrane; Single-pass membrane protein. |
| Tissue specificity | Adrenal glands, testes and ovaries. |
| Involvement in disease | Defects in HSD3B2 are the cause of adrenal hyperplasia type 2 (AH2) [MIM:201810]. AH2 is a form of congenital adrenal hyperplasia, a common recessive disease due to defective synthesis of cortisol. Congenital adrenal hyperplasia is characterized by androgen excess leading to ambiguous genitalia in affected females, rapid somatic growth during childhood in both sexes with premature closure of the epiphyses and short adult stature. Four clinical types: 'salt wasting' (SW, the most severe type), 'simple virilizing' (SV, less severely affected patients), with normal aldosterone biosynthesis, 'non-classic form' or late onset (NC or LOAH), and 'cryptic' (asymptomatic). In AH2, virilization is much less marked or does not occur. AH2 is frequently lethal in early life. Ref.10 Ref.11 Ref.12 Ref.13 Ref.14 Ref.15 Ref.16 Ref.17 Ref.18 Ref.19 Ref.20 Ref.21 Ref.22 Ref.23 Ref.24 Mild HSD3B2 deficiency in hyperandrogenic females is associated with characteristic traits of polycystic ovary syndrome, such as insulin resistance and luteinizing hormon hypersecretion. |
| Sequence similarities | Belongs to the 3-beta-HSD family. |
| Sequence caution | The sequence AAC60600.1 differs from that shown. Reason: Frameshift at position 186. The frameshift is caused by a single nucleotide insertion which is found in AH2. |
Ontologies
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: P26439-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: P26439-2) The sequence of this isoform differs from the canonical sequence as follows: 103-222: GTQLLLEACV...SVGKFSTVNP → ELQNKIKLTV...FIDEKTRTEQ 223-372: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Initiator methionine | 1 | 1 | Removed By similarity | ||||||
| Chain | 2 – 372 | 371 | 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 | PRO_0000087775 | |||||
Regions | |||||||||
| Transmembrane | 287 – 307 | 21 | Potential | ||||||
Sites | |||||||||
| Active site | 154 | 1 | Proton acceptor By similarity | ||||||
| Binding site | 158 | 1 | NAD By similarity | ||||||
Natural variations | |||||||||
| Alternative sequence | 103 – 222 | 120 | GTQLL…STVNP → ELQNKIKLTVLEGDILDEPF LKRACQDVSVVIHTACIIDV FGVTHRQSIMNVNVKGRVAW GGDKARWGNEDQKEGQEGKR SLSIEHLLCSGPSDFADHYQ LGELKAAIFSFIDEKTRTEQ in isoform 2. | VSP_037399 | |||||
| Alternative sequence | 223 – 372 | 150 | Missing in isoform 2. | VSP_037400 | |||||
| Natural variant | 10 | 1 | A → E in AH2; activity abolished. Ref.23 | VAR_010517 | |||||
| Natural variant | 10 | 1 | A → V in AH2; nonsalt-wasting form. Ref.23 | VAR_010518 | |||||
| Natural variant | 15 | 1 | G → D in AH2; activity abolished. Ref.16 | VAR_010519 | |||||
| Natural variant | 74 | 1 | D → N: dbSNP rs4986954. | VAR_048099 | |||||
| Natural variant | 82 | 1 | A → T in AH2. Ref.14 | VAR_010520 | |||||
| Natural variant | 94 | 1 | E → Q: dbSNP rs6211. | VAR_014818 | |||||
| Natural variant | 100 | 1 | N → S in AH2; nonsalt-wasting form. Ref.19 | VAR_010521 | |||||
| Natural variant | 108 | 1 | L → W in AH2; activity abolished. Ref.11 | VAR_010522 | |||||
| Natural variant | 129 | 1 | G → R in AH2; nonsalt-wasting form. Ref.13 Ref.22 | VAR_010523 | |||||
| Natural variant | 142 | 1 | E → K in AH2; activity abolished. Ref.10 Ref.24 | VAR_000006 | |||||
| Natural variant | 155 | 1 | P → L in AH2; nonsalt-wasting form. | VAR_010524 | |||||
| Natural variant | 167 | 1 | A → V in AH2; late onset; almost normal activity. | VAR_010525 | |||||
| Natural variant | 173 | 1 | L → R in AH2; nonsalt-wasting form. Ref.15 | VAR_010526 | |||||
| Natural variant | 186 | 1 | P → L in AH2; activity abolished. Ref.11 | VAR_010527 | |||||
| Natural variant | 205 | 1 | L → P in AH2. Ref.17 | VAR_000007 | |||||
| Natural variant | 213 | 1 | S → G in AH2; late onset; partial loss of activity. | VAR_010528 | |||||
| Natural variant | 216 | 1 | K → E in AH2; late onset; partial loss of activity. | VAR_010529 | |||||
| Natural variant | 222 | 1 | P → H in AH2; nonsalt-wasting form; activity abolished. Ref.22 Ref.24 | VAR_010530 | |||||
| Natural variant | 222 | 1 | P → Q in AH2; activity abolished. Ref.22 Ref.24 | VAR_010531 | |||||
| Natural variant | 222 | 1 | P → T in AH2. Ref.22 Ref.24 | VAR_015411 | |||||
| Natural variant | 231 – 238 | 8 | Missing in AH2; activity abolished. | VAR_010532 | |||||
| Natural variant | 236 | 1 | L → S in AH2; mild; 100% of activity. dbSNP rs35887327. Ref.20 | VAR_010533 | |||||
| Natural variant | 245 | 1 | A → P in AH2; loss of 88% of activity. Ref.10 | VAR_000008 | |||||
| Natural variant | 253 | 1 | Y → N in AH2; activity abolished. Ref.10 | VAR_000009 | |||||
| Natural variant | 254 | 1 | Y → D in AH2; activity abolished. Ref.12 | VAR_000010 | |||||
| Natural variant | 259 | 1 | T → M in AH2; activity abolished. Ref.18 Ref.22 | VAR_010534 | |||||
| Natural variant | 259 | 1 | T → R in AH2; activity abolished. Ref.18 Ref.22 | VAR_000011 | |||||
| Natural variant | 294 | 1 | G → V in AH2; nonsalt-wasting form; activity abolished. | VAR_010535 | |||||
Experimental info | |||||||||
| Sequence conflict | 52 – 53 | 2 | RT → KI in AAD14329. Ref.7 | ||||||
| Sequence conflict | 92 – 94 | 3 | HRE → RRQ in AAD14329. Ref.7 | ||||||
| Sequence conflict | 232 | 1 | H → L in BAD96717. Ref.4 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Structure of the human type II 3 beta-hydroxysteroid dehydrogenase/delta 5-delta 4 isomerase (3 beta-HSD) gene: adrenal and gonadal specificity." Lachance Y., Luu-The V., Verreault H., Dumont M., Rheaume E., Leblanc G., Labrie F. DNA Cell Biol. 10:701-711(1991) [PubMed: 1741954] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [2] | "Structure and expression of a new complementary DNA encoding the almost exclusive 3 beta-hydroxysteroid dehydrogenase/delta 5-delta 4-isomerase in human adrenals and gonads." Rheaume E., Lachance Y., Zhao H.-F., Breton N., Dumont M., de Launoit Y., Trudel C., Luu-The V., Simard J., Labrie F. Mol. Endocrinol. 5:1147-1157(1991) [PubMed: 1944309] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Tissue: Adrenal gland. |
| [3] | The German cDNA consortium Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), VARIANT GLN-94. Tissue: Adrenal gland. |
| [4] | Suzuki Y., Sugano S., Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S. Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Small intestine. |
| [5] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed: 16710414] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Brain. |
| [7] | "Variation in the expression of human 3 beta-hydroxysteroid dehydrogenase." Russell A.J., McCartin S., Corcao G., Burridge S.M., McBride M.W., McNicol A.M., Hawes C.S., Mason J.I., Sutcliffe R.G. Endocr. Res. 21:485-494(1995) [PubMed: 7588414] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 49-102. |
| [8] | "Congenital adrenal hyperplasia due to point mutations in the type II 3 beta-hydroxysteroid dehydrogenase gene." Rheaume E., Simard J., Morel Y., Mebarki F., Zachmann M., Forest M.G., New M.I., Labrie F. Nat. Genet. 1:239-245(1992) [PubMed: 1363812] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 167-205. |
| [9] | "The hormonal phenotype of nonclassic 3 beta-hydroxysteroid dehydrogenase (HSD3B) deficiency in hyperandrogenic females is associated with insulin-resistant polycystic ovary syndrome and is not a variant of inherited HSD3B2 deficiency." Carbunaru G., Prasad P., Scoccia B., Shea P., Hopwood N., Ziai F., Chang Y.T., Myers S.E., Mason J.I., Pang S. J. Clin. Endocrinol. Metab. 89:783-794(2004) [PubMed: 14764797] [Abstract] Cited for: POSSIBLE INVOLVEMENT IN INSULIN-RESISTANT POLYCYSTIC OVARY SYNDROME. |
| [10] | "Molecular basis of congenital adrenal hyperplasia due to 3 beta-hydroxysteroid dehydrogenase deficiency." Simard J., Rheaume E., Sanchez R., Laflamme N., de Launoit Y., Luu-The V., van Seters A.P., Gordon R.D., Bettendorf M., Heinrich U., Moshang T., New M.I., Labrie F. Mol. Endocrinol. 7:716-728(1993) [PubMed: 8316254] [Abstract] Cited for: VARIANTS AH2 LYS-142; PRO-245 AND ASN-253. |
| [11] | "Functional characterization of the novel L108W and P186L mutations detected in the type II 3 beta-hydroxysteroid dehydrogenase gene of a male pseudohermaphrodite with congenital adrenal hyperplasia." Sanchez R., Mebarki F., Rheaume E., Laflamme N., Forest M.G., Bey-Omar F., David M., Morel Y., Labrie F., Simard J. Hum. Mol. Genet. 3:1639-1645(1994) [PubMed: 7833923] [Abstract] Cited for: VARIANTS AH2 TRP-108 AND LEU-186. |
| [12] | "Detection and functional characterization of the novel missense mutation Y254D in type II 3 beta-hydroxysteroid dehydrogenase (3 beta HSD) gene of a female patient with nonsalt-losing 3 beta HSD deficiency." Sanchez R., Rheaume E., Laflamme N., Rosenfield R.L., Labrie F., Simard J. J. Clin. Endocrinol. Metab. 78:561-567(1994) [PubMed: 8126127] [Abstract] Cited for: VARIANT AH2 ASP-254. |
| [13] | "Molecular basis of congenital adrenal hyperplasia in two siblings with classical nonsalt-losing 3 beta-hydroxysteroid dehydrogenase deficiency." Rheaume E., Sanchez R., Simard J., Chang Y.T., Wang J., Pang S., Labrie F. J. Clin. Endocrinol. Metab. 79:1012-1018(1994) [PubMed: 7962268] [Abstract] Cited for: VARIANT AH2 ARG-129. |
| [14] | "Mutation in 3 beta-hydroxysteroid dehydrogenase type II associated with pseudohermaphroditism in males and premature pubarche or cryptic expression in females." Mendonca B.B., Russell A.J., Vasconcelos-Leite M., Arnhold I.J., Bloise W., Wajchenberg B.L., Nicolau W., Sutcliffe R.G., Wallace A.M. J. Mol. Endocrinol. 12:119-122(1994) [PubMed: 8185809] [Abstract] Cited for: VARIANT AH2 THR-82. |
| [15] | "Mutation in the human gene for 3 beta-hydroxysteroid dehydrogenase type II leading to male pseudohermaphroditism without salt loss." Russell A.J., Wallace A.M., Forest M.G., Donaldson M.D., Edwards C.R., Sutcliffe R.G. J. Mol. Endocrinol. 12:225-237(1994) [PubMed: 8060486] [Abstract] Cited for: VARIANT AH2 ARG-173. |
| [16] | "Identification and characterization of the G15D mutation found in a male patient with 3 beta-hydroxysteroid dehydrogenase (3 beta-HSD) deficiency: alteration of the putative NAD-binding domain of type II 3 beta-HSD." Rheaume E., Sanchez R., Mebarki F., Gagnon E., Carel J.-C., Chaussain J.-L., Morel Y., Labrie F., Simard J. Biochemistry 34:2893-2900(1995) [PubMed: 7893703] [Abstract] Cited for: VARIANT AH2 ASP-15. |
| [17] | "A novel missense mutation in the type II 3 beta-hydroxysteroid dehydrogenase gene in a family with classical salt-wasting congenital adrenal hyperplasia due to 3 beta-hydroxysteroid dehydrogenase deficiency." Katsumata N., Tanae A., Yasunaga T., Horikawa R., Tanaka T., Hibi I. Hum. Mol. Genet. 4:745-746(1995) [PubMed: 7633426] [Abstract] Cited for: VARIANT AH2 PRO-205. |
| [18] | "Molecular analysis of type II 3 beta-hydroxysteroid dehydrogenase gene in Japanese patients with classical 3 beta-hydroxysteroid dehydrogenase deficiency." Tajima T., Fujieda K., Nakae J., Shinohara N., Yoshimoto M., Baba T., Kinoshita E., Igarashi Y., Oomura T. Hum. Mol. Genet. 4:969-971(1995) [PubMed: 7633460] [Abstract] Cited for: VARIANT AH2 ARG-259. |
| [19] | "Nonsalt-losing male pseudohermaphroditism due to the novel homozygous N100S mutation in the type II 3 beta-hydroxysteroid dehydrogenase gene." Mebarki F., Sanchez R., Rheaume E., Laflamme N., Simard J., Forest M.G., Bey-Omar F., David M., Labrie F., Morel Y. J. Clin. Endocrinol. Metab. 80:2127-2134(1995) [PubMed: 7608265] [Abstract] Cited for: VARIANT AH2 SER-100. |
| [20] | "Variants of the type II 3beta-hydroxysteroid dehydrogenase gene in children with premature pubic hair and hyperandrogenic adolescents." Nayak S., Lee P.A., Witchel S.F. Mol. Genet. Metab. 64:184-192(1998) [PubMed: 9719627] [Abstract] Cited for: VARIANT AH2 SER-236. |
| [21] | "New insight into the molecular basis of 3beta-hydroxysteroid dehydrogenase deficiency: identification of eight mutations in the HSD3B2 gene in eleven patients from seven new families and comparison of the functional properties of twenty-five mutant enzymes." Moisan A.M., Ricketts M.L., Tardy V., Desrochers M., Mebarki F., Chaussain J.-L., Cabrol S., Raux-Demay M.C., Forest M.G., Sippell W.G., Peter M., Morel Y., Simard J. J. Clin. Endocrinol. Metab. 84:4410-4425(1999) [PubMed: 10599696] [Abstract] Cited for: VARIANTS AH2. |
| [22] | "Mutations in the type II 3beta-hydroxysteroid dehydrogenase (HSD3B2) gene can cause premature pubarche in girls." Marui S., Castro M., Latronico A.C., Elias L.L., Arnhold I.J., Moreira A.C., Mendonca B.B. Clin. Endocrinol. (Oxf.) 52:67-75(2000) [PubMed: 10651755] [Abstract] Cited for: VARIANTS AH2 ARG-129; GLN-222 AND MET-259. |
| [23] | "A novel A10E homozygous mutation in the HSD3B2 gene causing severe salt-wasting 3beta-hydroxysteroid dehydrogenase deficiency in 46,XX and 46,XY French-Canadians: evaluation of gonadal function after puberty." Alos N., Moisan A.M., Ward L., Desrochers M., Legault L., Leboeuf G., van Vliet G., Simard J. J. Clin. Endocrinol. Metab. 85:1968-1974(2000) [PubMed: 10843183] [Abstract] Cited for: VARIANT AH2 GLU-10. |
| [24] | "A novel nonstop mutation in the stop codon and a novel missense mutation in the type II 3-beta-hydroxysteroid dehydrogenase (3-beta-HSD) gene causing, respectively, nonclassic and classic 3-beta-HSD deficiency congenital adrenal hyperplasia." Pang S., Wang W., Rich B., David R., Chang Y.T., Carbunaru G., Myers S.E., Howie A.F., Smillie K.J., Mason J.I. J. Clin. Endocrinol. Metab. 87:2556-2563(2002) [PubMed: 12050213] [Abstract] Cited for: VARIANTS AH2 LYS-142 AND THR-222. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| M77144 Genomic DNA. Translation: AAA36014.1. M67466 mRNA. Translation: AAA36016.1. CR627415 mRNA. Translation: CAH10504.1. AK222997 mRNA. Translation: BAD96717.1. AL359553 Genomic DNA. Translation: CAC19799.1. BC038419 mRNA. Translation: AAH38419.1. S80140 Genomic DNA. Translation: AAD14329.1. S60309 Genomic DNA. Translation: AAC60599.1. S60310 Genomic DNA. Translation: AAC60600.1. Frameshift. | |
| IPI | IPI00218494. |
| PIR | DEHUH2. A39488. |
| RefSeq | NP_000189.1. |
| UniGene | Hs.654399 |
3D structure databases | |
| ModBase | Search... |
Proteomic databases | |
| PRIDE | P26439. |
Genome annotation databases | |
| Ensembl | ENSG00000203859. Homo sapiens. [Contig view] |
| GeneID | 3284. |
| KEGG | hsa:3284. |
| UCSC | uc001ehs.1. human. |
Organism-specific databases | |
| GeneCards | GC01P119669. |
| H-InvDB | HIX0023638. |
| HGNC | HGNC:5218. HSD3B2. |
| MIM | 201810. gene+phenotype. |
| Orphanet | 418. Congenital adrenal hyperplasia. 1331. Prostate cancer, familial. 3185. Stein-Leventhal syndrome. |
| PharmGKB | PA29487. |
| GenAtlas | Search... |
Phylogenomic databases | |
| HOGENOM | P26439. |
| HOVERGEN | P26439. |
| OMA | P26439. LATCAIR. |
Enzyme and pathway databases | |
| BRENDA | 1.1.1.145. 247. 5.3.3.1. 247. |
| Reactome | REACT_15314. Hormone biosynthesis. REACT_602. Metabolism of lipids and lipoproteins. |
Gene expression databases | |
| ArrayExpress | P26439. |
| Bgee | P26439. |
| CleanEx | HS_HSD3B2. |
| GermOnline | ENSG00000203859. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR002225. 3Beta_OHSteriod_DH/Estase. IPR016040. NAD(P)-bd_dom. [Graphical view] |
| Gene3D | G3DSA:3.40.50.720. NAD(P)-bd. 1 hit. |
| Pfam | PF01073. 3Beta_HSD. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| DrugBank | DB00157. NADH. DB01108. Trilostane. |
| NextBio | 13035. |
| SOURCE | Search... |
Entry information
| Entry name | 3BHS2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P26439 Secondary accession number(s): Q16010 Q9UD08 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
Relevant documents
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |
| Recent format changes Overview of recent format changes |

Clusters with


