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P26405

- RFBK_SALTY

UniProt

P26405 - RFBK_SALTY

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Protein

Phosphomannomutase

Gene
rfbK, STM2083
Organism
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS group B O antigen.

Catalytic activityi

Alpha-D-mannose 1-phosphate = D-mannose 6-phosphate.

Cofactori

Binds 1 magnesium ion per subunit By similarity.

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei111 – 1111Phosphoserine intermediate By similarity
Metal bindingi111 – 1111Magnesium; via phosphate group By similarity
Metal bindingi245 – 2451Magnesium By similarity
Metal bindingi247 – 2471Magnesium By similarity
Metal bindingi249 – 2491Magnesium By similarity

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. phosphomannomutase activity Source: UniProtKB-EC

GO - Biological processi

  1. GDP-mannose biosynthetic process Source: UniProtKB-UniPathway
  2. O antigen biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Isomerase

Keywords - Biological processi

Lipopolysaccharide biosynthesis

Keywords - Ligandi

Magnesium, Metal-binding

Enzyme and pathway databases

BioCyciSENT99287:GCTI-2095-MONOMER.
UniPathwayiUPA00126; UER00424.
UPA00281.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphomannomutase (EC:5.4.2.8)
Short name:
PMM
Gene namesi
Name:rfbK
Ordered Locus Names:STM2083
OrganismiSalmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Taxonomic identifieri99287 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
ProteomesiUP000001014: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei30 – 4617Helical; Reviewed predictionAdd
BLAST
Transmembranei265 – 28420Helical; Reviewed predictionAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 477477PhosphomannomutasePRO_0000147826Add
BLAST

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiP26405.
PRIDEiP26405.

Interactioni

Protein-protein interaction databases

STRINGi99287.STM2083.

Structurei

3D structure databases

ProteinModelPortaliP26405.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG1109.
HOGENOMiHOG000066295.
KOiK01840.
OMAiRCYVEAS.
OrthoDBiEOG6TFCNH.
PhylomeDBiP26405.

Family and domain databases

Gene3Di3.30.310.50. 1 hit.
3.40.120.10. 1 hit.
InterProiIPR005844. A-D-PHexomutase_a/b/a-I.
IPR016055. A-D-PHexomutase_a/b/a-I/II/III.
IPR005845. A-D-PHexomutase_a/b/a-II.
IPR005846. A-D-PHexomutase_a/b/a-III.
IPR005843. A-D-PHexomutase_C.
IPR016066. A-D-PHexomutase_CS.
[Graphical view]
PfamiPF02878. PGM_PMM_I. 1 hit.
PF02879. PGM_PMM_II. 1 hit.
PF02880. PGM_PMM_III. 1 hit.
PF00408. PGM_PMM_IV. 1 hit.
[Graphical view]
SUPFAMiSSF53738. SSF53738. 3 hits.
SSF55957. SSF55957. 1 hit.
PROSITEiPS00710. PGM_PMM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P26405-1 [UniParc]FASTAAdd to Basket

« Hide

MNVVNNSRDV IYSSGIVFGT SGARGLVKDF TPQVCAAFTV SFVAVMQEHF    50
SFDTVALAID NRPSSYGMAQ ACAAALADKG VNCIFYGVVP TPALAFQSMS 100
DNMPAIMVTG SHIPFERNGL KFYRPDGEIT KHDEAAILSV EDTCSHLELK 150
ELIVSEMAAV NYISRYTSLF STPFLKNKRI GIYEHSSAGR DLYKPLFIAL 200
GAEVVSLGRS DNFVPIDTEA VSKEDREKAR SWAKEFDLDA IFSTDGDGDR 250
PLIADEAGEW LRGDILGLLC SLALDAEAVA IPVSCNSIIS SGRFFKHVKL 300
TKIGSPYVIE AFNELSRSYS RIVGFEANGG FLLGSDICIN EQNLHALPTR 350
DAVLPAIMLL YKSRNTSISA LVNELPTRYT HSDRLQGITT DKSQSLISMG 400
RENLSNLLSY IGLENEGAIS TDMTDGMRIT LRDGCIVHLR ASGNAPELRC 450
YAEANLLNRA QDLVNTTLAN IKKRCLL 477
Length:477
Mass (Da):52,086
Last modified:August 1, 1992 - v1
Checksum:iBA6BF851AB931915
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X56793 Genomic DNA. Translation: CAA40129.1.
AE006468 Genomic DNA. Translation: AAL20987.1.
PIRiS15313.
RefSeqiNP_461028.1. NC_003197.1.
WP_001103643.1. NC_003197.1.

Genome annotation databases

EnsemblBacteriaiAAL20987; AAL20987; STM2083.
GeneIDi1253604.
KEGGistm:STM2083.
PATRICi32382749. VBISalEnt20916_2205.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X56793 Genomic DNA. Translation: CAA40129.1 .
AE006468 Genomic DNA. Translation: AAL20987.1 .
PIRi S15313.
RefSeqi NP_461028.1. NC_003197.1.
WP_001103643.1. NC_003197.1.

3D structure databases

ProteinModelPortali P26405.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 99287.STM2083.

Proteomic databases

PaxDbi P26405.
PRIDEi P26405.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAL20987 ; AAL20987 ; STM2083 .
GeneIDi 1253604.
KEGGi stm:STM2083.
PATRICi 32382749. VBISalEnt20916_2205.

Phylogenomic databases

eggNOGi COG1109.
HOGENOMi HOG000066295.
KOi K01840.
OMAi RCYVEAS.
OrthoDBi EOG6TFCNH.
PhylomeDBi P26405.

Enzyme and pathway databases

UniPathwayi UPA00126 ; UER00424 .
UPA00281 .
BioCyci SENT99287:GCTI-2095-MONOMER.

Family and domain databases

Gene3Di 3.30.310.50. 1 hit.
3.40.120.10. 1 hit.
InterProi IPR005844. A-D-PHexomutase_a/b/a-I.
IPR016055. A-D-PHexomutase_a/b/a-I/II/III.
IPR005845. A-D-PHexomutase_a/b/a-II.
IPR005846. A-D-PHexomutase_a/b/a-III.
IPR005843. A-D-PHexomutase_C.
IPR016066. A-D-PHexomutase_CS.
[Graphical view ]
Pfami PF02878. PGM_PMM_I. 1 hit.
PF02879. PGM_PMM_II. 1 hit.
PF02880. PGM_PMM_III. 1 hit.
PF00408. PGM_PMM_IV. 1 hit.
[Graphical view ]
SUPFAMi SSF53738. SSF53738. 3 hits.
SSF55957. SSF55957. 1 hit.
PROSITEi PS00710. PGM_PMM. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Structure and sequence of the rfb (O antigen) gene cluster of Salmonella serovar typhimurium (strain LT2)."
    Jiang X.-M., Neal B., Santiago F., Lee S.J., Romana L.K., Reeves P.R.
    Mol. Microbiol. 5:695-713(1991) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: LT2.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LT2 / SGSC1412 / ATCC 700720.

Entry informationi

Entry nameiRFBK_SALTY
AccessioniPrimary (citable) accession number: P26405
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 1, 1992
Last sequence update: August 1, 1992
Last modified: September 3, 2014
This is version 110 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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