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P26366

- AMIB_SALTY

UniProt

P26366 - AMIB_SALTY

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Protein

N-acetylmuramoyl-L-alanine amidase AmiB

Gene
amiB, STM4358
Organism
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Cell-wall hydrolase involved in septum cleavage during cell division By similarity.

Catalytic activityi

Hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues in certain cell-wall glycopeptides.

GO - Molecular functioni

  1. N-acetylmuramoyl-L-alanine amidase activity Source: UniProtKB-EC

GO - Biological processi

  1. peptidoglycan catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Cell wall biogenesis/degradation

Enzyme and pathway databases

BioCyciSENT99287:GCTI-4390-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
N-acetylmuramoyl-L-alanine amidase AmiB (EC:3.5.1.28)
Gene namesi
Name:amiB
Ordered Locus Names:STM4358
OrganismiSalmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Taxonomic identifieri99287 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
ProteomesiUP000001014: Chromosome

Subcellular locationi

Periplasm By similarity

GO - Cellular componenti

  1. periplasmic space Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222 Reviewed predictionAdd
BLAST
Chaini23 – 439417N-acetylmuramoyl-L-alanine amidase AmiBPRO_0000006463Add
BLAST

Proteomic databases

PaxDbiP26366.
PRIDEiP26366.

Interactioni

Protein-protein interaction databases

STRINGi99287.STM4358.

Structurei

3D structure databases

ProteinModelPortaliP26366.

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi130 – 1356Poly-Pro

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG0860.
HOGENOMiHOG000263828.
KOiK01448.
OMAiLNADPMF.
OrthoDBiEOG6CP3X3.
PhylomeDBiP26366.

Family and domain databases

Gene3Di3.40.630.40. 2 hits.
InterProiIPR002508. CW_Hdrlase/autolysin_cat.
[Graphical view]
PfamiPF01520. Amidase_3. 1 hit.
[Graphical view]
SMARTiSM00646. Ami_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P26366-1 [UniParc]FASTAAdd to Basket

« Hide

MIYRIKNAVI AALILLCAQA GAASLSDIQV SNGEQQARIT LSFIGEPEYA    50
YSQDGKRTVA LDIRQTGVIQ GLPLQFSGNN LVKTIRAGTP KDAQSLRLLV 100
DLTENGKTEA VKRQNGGNYT VIFTINADVP PPPPPVVAKR VESAPRPTEP 150
ARNPFKSSDD RLTGVTSSNT VTRPAARASA GAGDKVVIAI DAGHGGQDPG 200
AIGPGGTREK NVTIAIARKL RTLLNNDPMF KGVLTRDGDY FISVMGRSDV 250
ARKQNANFLV SIHADAAPNR DATGASVWVL SNRRANSEMA NWLEQHEKQS 300
ELLGGAGDVL ANSQSDPYLS QAVLDLQFGH SQRVGYDVAT NVLSQLDGVG 350
SLHKRRPEHA SLGVLRSPDI PSILVETGFI SNHGEERLLA SDRYQQQIAD 400
AIYRGLRKYF AAHPIQSAPQ GGPGQTASTN QPGAITAAN 439
Length:439
Mass (Da):46,790
Last modified:December 19, 2001 - v2
Checksum:i01B2BEB753D34DE9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE006468 Genomic DNA. Translation: AAL23178.1.
M29687 Genomic DNA. No translation available.
RefSeqiNP_463219.1. NC_003197.1.

Genome annotation databases

EnsemblBacteriaiAAL23178; AAL23178; STM4358.
GeneIDi1255884.
KEGGistm:STM4358.
PATRICi32387637. VBISalEnt20916_4582.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE006468 Genomic DNA. Translation: AAL23178.1 .
M29687 Genomic DNA. No translation available.
RefSeqi NP_463219.1. NC_003197.1.

3D structure databases

ProteinModelPortali P26366.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 99287.STM4358.

Proteomic databases

PaxDbi P26366.
PRIDEi P26366.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAL23178 ; AAL23178 ; STM4358 .
GeneIDi 1255884.
KEGGi stm:STM4358.
PATRICi 32387637. VBISalEnt20916_4582.

Phylogenomic databases

eggNOGi COG0860.
HOGENOMi HOG000263828.
KOi K01448.
OMAi LNADPMF.
OrthoDBi EOG6CP3X3.
PhylomeDBi P26366.

Enzyme and pathway databases

BioCyci SENT99287:GCTI-4390-MONOMER.

Family and domain databases

Gene3Di 3.40.630.40. 2 hits.
InterProi IPR002508. CW_Hdrlase/autolysin_cat.
[Graphical view ]
Pfami PF01520. Amidase_3. 1 hit.
[Graphical view ]
SMARTi SM00646. Ami_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LT2 / SGSC1412 / ATCC 700720.
  2. "Nucleotide sequence of the Salmonella typhimurium mutL gene required for mismatch repair: homology of MutL to HexB of Streptococcus pneumoniae and to PMS1 of the yeast Saccharomyces cerevisiae."
    Mankovich J.A., McIntyre C.A., Walker G.C.
    J. Bacteriol. 171:5325-5331(1989) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 340-439.
    Strain: LT2.

Entry informationi

Entry nameiAMIB_SALTY
AccessioniPrimary (citable) accession number: P26366
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 1, 1992
Last sequence update: December 19, 2001
Last modified: July 9, 2014
This is version 89 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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