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Protein

Nucleoprotein

Gene

N

Organism
Tomato spotted wilt virus (strain Bulgarian L3) (TSWV)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Encapsidates the RNA.

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein

Keywords - Ligandi

RNA-binding, Viral nucleoprotein

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleoprotein
Alternative name(s):
Nucleocapsid protein
Short name:
Protein N
Gene namesi
Name:N
OrganismiTomato spotted wilt virus (strain Bulgarian L3) (TSWV)
Taxonomic identifieri36415 [NCBI]
Taxonomic lineageiVirusesssRNA virusesssRNA negative-strand virusesBunyaviridaeTospovirus
Virus hostiFrankliniella occidentalis (Western flower thrips) [TaxID: 133901]
Scirtothrips dorsalis [TaxID: 163899]
Solanum lycopersicum (Tomato) (Lycopersicon esculentum) [TaxID: 4081]
Thrips tabaci [TaxID: 161014]

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Capsid protein, Helical capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 258258NucleoproteinPRO_0000222004Add
BLAST

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR002517. Tospo_nucleocap.
[Graphical view]
PfamiPF01533. Tospo_nucleocap. 1 hit.
[Graphical view]
PIRSFiPIRSF003948. N_TospoV. 1 hit.
ProDomiPD003056. Tospo_nucleocap. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P26001-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKVKLTKES IVALLTQGKD LEFEEDQNLV AFNFKTFCLE NLDQIKKMSV
60 70 80 90 100
ISCLTFLKNR QSIMKVIKQS DFTFGKITIK KTSDRIGATD MTFRRLDSLI
110 120 130 140 150
RVRLVEETGN SENLNTIKSK IASHPLIQAY GLPLDDAKSV RLAIMLGGSL
160 170 180 190 200
PLIASVDSFE MISVVLAIYQ DAKYKDLGID PKKYDTKEAL GKVCTVLKSK
210 220 230 240 250
AFEMNEDQVK KGKEYAAILS SSNPNAKGSI AMEHYSETLN KFYEMFGVKK

QAKLTELA
Length:258
Mass (Da):28,903
Last modified:May 1, 1992 - v1
Checksum:iA46DDAEC2BCA2432
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D13926 Genomic RNA. Translation: BAA03025.1.
PIRiJQ0955. VHVUW1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D13926 Genomic RNA. Translation: BAA03025.1.
PIRiJQ0955. VHVUW1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR002517. Tospo_nucleocap.
[Graphical view]
PfamiPF01533. Tospo_nucleocap. 1 hit.
[Graphical view]
PIRSFiPIRSF003948. N_TospoV. 1 hit.
ProDomiPD003056. Tospo_nucleocap. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Publicationsi

  1. "Cloning and sequencing of the S RNA from a Bulgarian isolate of tomato spotted wilt virus."
    Maiss E., Ivanova L., Breyel E., Adam G.
    J. Gen. Virol. 72:461-464(1991) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiNCAP_TSWVL
AccessioniPrimary (citable) accession number: P26001
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 1992
Last sequence update: May 1, 1992
Last modified: June 24, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.