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P26001 (NCAP_TSWVL) Reviewed, UniProtKB/Swiss-Prot

Last modified October 16, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Nucleoprotein
Alternative name(s):
Nucleocapsid protein
Short name=Protein N
Gene names
Name:N
OrganismTomato spotted wilt virus (strain Bulgarian L3) (TSWV)
Taxonomic identifier36415 [NCBI]
Taxonomic lineageVirusesssRNA negative-strand virusesBunyaviridaeTospovirus
Virus hostFrankliniella occidentalis (Western flower thrips) [TaxID: 133901]
Scirtothrips dorsalis [TaxID: 163899]
Solanum lycopersicum (Tomato) (Lycopersicon esculentum) [TaxID: 4081]
Thrips tabaci [TaxID: 161014]

Protein attributes

Sequence length258 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Encapsidates the RNA.

Subcellular location

Virion Potential.

Sequence similarities

Belongs to the tospovirus nucleocapsid protein family.

Ontologies

Keywords
   Cellular componentCapsid protein
Helical capsid protein
Virion
   LigandRNA-binding
Viral nucleoprotein
   Molecular functionRibonucleoprotein
Gene Ontology (GO)
   Cellular_componenthelical viral capsid

Inferred from electronic annotation. Source: UniProtKB-KW

ribonucleoprotein complex

Inferred from electronic annotation. Source: UniProtKB-KW

viral nucleocapsid

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 258258Nucleoprotein
PRO_0000222004

Sequences

Sequence LengthMass (Da)Tools
P26001 [UniParc].

Last modified May 1, 1992. Version 1.
Checksum: A46DDAEC2BCA2432

FASTA25828,903
        10         20         30         40         50         60 
MSKVKLTKES IVALLTQGKD LEFEEDQNLV AFNFKTFCLE NLDQIKKMSV ISCLTFLKNR 

        70         80         90        100        110        120 
QSIMKVIKQS DFTFGKITIK KTSDRIGATD MTFRRLDSLI RVRLVEETGN SENLNTIKSK 

       130        140        150        160        170        180 
IASHPLIQAY GLPLDDAKSV RLAIMLGGSL PLIASVDSFE MISVVLAIYQ DAKYKDLGID 

       190        200        210        220        230        240 
PKKYDTKEAL GKVCTVLKSK AFEMNEDQVK KGKEYAAILS SSNPNAKGSI AMEHYSETLN 

       250 
KFYEMFGVKK QAKLTELA 

« Hide

References

[1]"Cloning and sequencing of the S RNA from a Bulgarian isolate of tomato spotted wilt virus."
Maiss E., Ivanova L., Breyel E., Adam G.
J. Gen. Virol. 72:461-464(1991) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
D13926 Genomic RNA. Translation: BAA03025.1.
PIRVHVUW1. JQ0955.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR002517. Tospo_nucleocap.
[Graphical view]
PfamPF01533. Tospo_nucleocap. 1 hit.
[Graphical view]
PIRSFPIRSF003948. N_TospoV. 1 hit.
ProDomPD003056. Tospo_nucleocap. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetSearch...

Entry information

Entry nameNCAP_TSWVL
AccessionPrimary (citable) accession number: P26001
Entry history
Integrated into UniProtKB/Swiss-Prot: May 1, 1992
Last sequence update: May 1, 1992
Last modified: October 16, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families