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P26000

- NCAP_TSWVH

UniProt

P26000 - NCAP_TSWVH

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Protein

Nucleoprotein

Gene
N
Organism
Tomato spotted wilt virus (strain Hawaiian) (TSWV)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

Encapsidates the RNA.

GO - Molecular functioni

  1. RNA binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein

Keywords - Ligandi

RNA-binding, Viral nucleoprotein

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleoprotein
Alternative name(s):
Nucleocapsid protein
Short name:
Protein N
Gene namesi
Name:N
OrganismiTomato spotted wilt virus (strain Hawaiian) (TSWV)
Taxonomic identifieri36416 [NCBI]
Taxonomic lineageiVirusesssRNA negative-strand virusesBunyaviridaeTospovirus
Virus hostiFrankliniella occidentalis (Western flower thrips) [TaxID: 133901]
Scirtothrips dorsalis [TaxID: 163899]
Solanum lycopersicum (Tomato) (Lycopersicon esculentum) [TaxID: 4081]
Thrips tabaci [TaxID: 161014]

Subcellular locationi

Virion Reviewed prediction

GO - Cellular componenti

  1. helical viral capsid Source: UniProtKB-KW
  2. ribonucleoprotein complex Source: UniProtKB-KW
  3. viral nucleocapsid Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Capsid protein, Helical capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 258258NucleoproteinPRO_0000222003Add
BLAST

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR002517. Tospo_nucleocap.
[Graphical view]
PfamiPF01533. Tospo_nucleocap. 1 hit.
[Graphical view]
PIRSFiPIRSF003948. N_TospoV. 1 hit.
ProDomiPD003056. Tospo_nucleocap. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P26000-1 [UniParc]FASTAAdd to Basket

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MSKVKLTKES IVALLTQGKD LEFEEDQNLV AFNFKTFCLE NLDQIKKMSI    50
ISCLTFLKNR QSIMKVIKQS DFTFGKITIK KTSDRIGATD MTFRRLDSLI 100
RVRLVEETGN SENLNTIKSK IASHPLIQAY GLPLDDAKSV RLAIMLGGSL 150
PLIASVDSFE MISVVLAIYQ DAKYKDLGID PKKYDTREAL GKVCTVLKSK 200
AFEMNEDQVK KGKEYAAILS SSNPNAKGSI AMEHYSETLN KFYEMFGVKK 250
QAKLTELA 258
Length:258
Mass (Da):28,945
Last modified:May 1, 1992 - v1
Checksum:iCF349E9DD0AE77E3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X61799 mRNA. Translation: CAA43904.1.
PIRiS17105.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X61799 mRNA. Translation: CAA43904.1 .
PIRi S17105.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR002517. Tospo_nucleocap.
[Graphical view ]
Pfami PF01533. Tospo_nucleocap. 1 hit.
[Graphical view ]
PIRSFi PIRSF003948. N_TospoV. 1 hit.
ProDomi PD003056. Tospo_nucleocap. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
ProtoNeti Search...

Publicationsi

  1. Kim J.W., Sun S.S.M., German T.L.
    Submitted (SEP-1991) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].

Entry informationi

Entry nameiNCAP_TSWVH
AccessioniPrimary (citable) accession number: P26000
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 1992
Last sequence update: May 1, 1992
Last modified: October 16, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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