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P25999

- NCAP_TSWV1

UniProt

P25999 - NCAP_TSWV1

Protein

Nucleoprotein

Gene

N

Organism
Tomato spotted wilt virus (strain Brazilian Br-01) (TSWV)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 48 (01 Oct 2014)
      Sequence version 1 (01 May 1992)
      Previous versions | rss
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    Functioni

    Encapsidates the RNA.

    GO - Molecular functioni

    1. RNA binding Source: UniProtKB-KW

    Keywords - Molecular functioni

    Ribonucleoprotein

    Keywords - Ligandi

    RNA-binding, Viral nucleoprotein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Nucleoprotein
    Alternative name(s):
    Nucleocapsid protein
    Short name:
    Protein N
    Gene namesi
    Name:N
    OrganismiTomato spotted wilt virus (strain Brazilian Br-01) (TSWV)
    Taxonomic identifieri36413 [NCBI]
    Taxonomic lineageiVirusesssRNA negative-strand virusesBunyaviridaeTospovirus
    Virus hostiFrankliniella occidentalis (Western flower thrips) [TaxID: 133901]
    Scirtothrips dorsalis [TaxID: 163899]
    Solanum lycopersicum (Tomato) (Lycopersicon esculentum) [TaxID: 4081]
    Thrips tabaci [TaxID: 161014]
    ProteomesiUP000006674: Genome

    Subcellular locationi

    Virion Curated

    GO - Cellular componenti

    1. helical viral capsid Source: UniProtKB-KW
    2. ribonucleoprotein complex Source: UniProtKB-KW
    3. viral nucleocapsid Source: UniProtKB-KW

    Keywords - Cellular componenti

    Capsid protein, Helical capsid protein, Virion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 258258NucleoproteinPRO_0000222001Add
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Family and domain databases

    InterProiIPR002517. Tospo_nucleocap.
    [Graphical view]
    PfamiPF01533. Tospo_nucleocap. 1 hit.
    [Graphical view]
    PIRSFiPIRSF003948. N_TospoV. 1 hit.
    ProDomiPD003056. Tospo_nucleocap. 1 hit.
    [Graphical view] [Entries sharing at least one domain]

    Sequencei

    Sequence statusi: Complete.

    P25999-1 [UniParc]FASTAAdd to Basket

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    MSKVKLTKES IVALLTQGKD LEFEEDQNLV AFNFKTFCLE NIDQIKKMSV    50
    ISCLTFLKNR QSIMKVIKQS DFTFGKITIK KTSDRIGGTD MTFRRLDSLI 100
    RVRLVEETGN SENLNTIKSK IASHPLIQAY GLPLDDAKSV RLAIMLGGSL 150
    PLIASVDSFE MISVVLAIYQ DAKYKDLGID PKKYDTKEAL GKVCTVLKSK 200
    AFEMNEDQVK KGKEYAAILS SSNPNAKGSV AMEHYSETLN KFYEMFGVKK 250
    QAKLAELA 258
    Length:258
    Mass (Da):28,845
    Last modified:May 1, 1992 - v1
    Checksum:iD5D9059D0799706C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D00645 Genomic RNA. Translation: BAA00541.1.
    PIRiJQ0548. VHVUWC.
    RefSeqiNP_049361.1. NC_002051.1.

    Genome annotation databases

    GeneIDi956581.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D00645 Genomic RNA. Translation: BAA00541.1 .
    PIRi JQ0548. VHVUWC.
    RefSeqi NP_049361.1. NC_002051.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 956581.

    Family and domain databases

    InterProi IPR002517. Tospo_nucleocap.
    [Graphical view ]
    Pfami PF01533. Tospo_nucleocap. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF003948. N_TospoV. 1 hit.
    ProDomi PD003056. Tospo_nucleocap. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    ProtoNeti Search...

    Publicationsi

    1. "The S RNA segment of tomato spotted wilt virus has an ambisense character."
      de Haan P., Wagemakers L., Peters D., Goldbach R.
      J. Gen. Virol. 71:1001-1007(1990) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

    Entry informationi

    Entry nameiNCAP_TSWV1
    AccessioniPrimary (citable) accession number: P25999
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 1, 1992
    Last sequence update: May 1, 1992
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3