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P25999

- NCAP_TSWV1

UniProt

P25999 - NCAP_TSWV1

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Protein

Nucleoprotein

Gene

N

Organism
Tomato spotted wilt virus (strain Brazilian Br-01) (TSWV)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Encapsidates the RNA.

GO - Molecular functioni

  1. RNA binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein

Keywords - Ligandi

RNA-binding, Viral nucleoprotein

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleoprotein
Alternative name(s):
Nucleocapsid protein
Short name:
Protein N
Gene namesi
Name:N
OrganismiTomato spotted wilt virus (strain Brazilian Br-01) (TSWV)
Taxonomic identifieri36413 [NCBI]
Taxonomic lineageiVirusesssRNA negative-strand virusesBunyaviridaeTospovirus
Virus hostiFrankliniella occidentalis (Western flower thrips) [TaxID: 133901]
Scirtothrips dorsalis [TaxID: 163899]
Solanum lycopersicum (Tomato) (Lycopersicon esculentum) [TaxID: 4081]
Thrips tabaci [TaxID: 161014]
ProteomesiUP000006674: Genome

Subcellular locationi

Virion Curated

GO - Cellular componenti

  1. helical viral capsid Source: UniProtKB-KW
  2. ribonucleoprotein complex Source: UniProtKB-KW
  3. viral nucleocapsid Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Capsid protein, Helical capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 258258NucleoproteinPRO_0000222001Add
BLAST

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR002517. Tospo_nucleocap.
[Graphical view]
PfamiPF01533. Tospo_nucleocap. 1 hit.
[Graphical view]
PIRSFiPIRSF003948. N_TospoV. 1 hit.
ProDomiPD003056. Tospo_nucleocap. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P25999-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MSKVKLTKES IVALLTQGKD LEFEEDQNLV AFNFKTFCLE NIDQIKKMSV
60 70 80 90 100
ISCLTFLKNR QSIMKVIKQS DFTFGKITIK KTSDRIGGTD MTFRRLDSLI
110 120 130 140 150
RVRLVEETGN SENLNTIKSK IASHPLIQAY GLPLDDAKSV RLAIMLGGSL
160 170 180 190 200
PLIASVDSFE MISVVLAIYQ DAKYKDLGID PKKYDTKEAL GKVCTVLKSK
210 220 230 240 250
AFEMNEDQVK KGKEYAAILS SSNPNAKGSV AMEHYSETLN KFYEMFGVKK

QAKLAELA
Length:258
Mass (Da):28,845
Last modified:May 1, 1992 - v1
Checksum:iD5D9059D0799706C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D00645 Genomic RNA. Translation: BAA00541.1.
PIRiJQ0548. VHVUWC.
RefSeqiNP_049361.1. NC_002051.1.

Genome annotation databases

GeneIDi956581.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D00645 Genomic RNA. Translation: BAA00541.1 .
PIRi JQ0548. VHVUWC.
RefSeqi NP_049361.1. NC_002051.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 956581.

Family and domain databases

InterProi IPR002517. Tospo_nucleocap.
[Graphical view ]
Pfami PF01533. Tospo_nucleocap. 1 hit.
[Graphical view ]
PIRSFi PIRSF003948. N_TospoV. 1 hit.
ProDomi PD003056. Tospo_nucleocap. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
ProtoNeti Search...

Publicationsi

  1. "The S RNA segment of tomato spotted wilt virus has an ambisense character."
    de Haan P., Wagemakers L., Peters D., Goldbach R.
    J. Gen. Virol. 71:1001-1007(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiNCAP_TSWV1
AccessioniPrimary (citable) accession number: P25999
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 1992
Last sequence update: May 1, 1992
Last modified: October 1, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3