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P25974 (GLCB_SOYBN) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 79. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Beta-conglycinin, beta chain
Gene names
Name:CG-4
OrganismGlycine max (Soybean) (Glycine hispida) [Reference proteome]
Taxonomic identifier3847 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja

Protein attributes

Sequence length439 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Seed storage protein. Accumulates during seed development and is hydrolyzed after germination to provide a carbon and nitrogen source for the developing seedling.

Subunit structure

The alpha'-, alpha-, and beta-subunits associate in various combinations to form trimeric proteins.

Subcellular location

Vacuolealeurone grain. Note: Embryo axis, and cotyledonary membrane-bound vacuolar protein bodies.

Sequence similarities

Belongs to the 7S seed storage protein family.

Ontologies

Keywords
   Cellular componentVacuole
   DomainSignal
   Molecular functionSeed storage protein
Storage protein
   PTMGlycoprotein
   Technical term3D-structure
Complete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentaleurone grain

Inferred from electronic annotation. Source: UniProtKB-SubCell

vacuole

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionnutrient reservoir activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 By similarity
Propeptide24 – 252 Potential
PRO_0000032190
Chain26 – 439414Beta-conglycinin, beta chain
PRO_0000032191

Amino acid modifications

Glycosylation3511N-linked (GlcNAc...) Potential

Secondary structure

............................................................................ 439
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P25974 [UniParc].

Last modified May 1, 1992. Version 1.
Checksum: DBD8AA2A0776088B

FASTA43950,552
        10         20         30         40         50         60 
MMRVRFPLLV LLGTVFLASV CVSLKVREDE NNPFYFRSSN SFQTLFENQN VRIRLLQRFN 

        70         80         90        100        110        120 
KRSPQLENLR DYRIVQFQSK PNTILLPHHA DADFLLFVLS GRAILTLVNN DDRDSYNLHP 

       130        140        150        160        170        180 
GDAQRIPAGT TYYLVNPHDH QNLKIIKLAI PVNKPGRYDD FFLSSTQAQQ SYLQGFSHNI 

       190        200        210        220        230        240 
LETSFHSEFE EINRVLFGEE EEQRQQEGVI VELSKEQIRQ LSRRAKSSSR KTISSEDEPF 

       250        260        270        280        290        300 
NLRSRNPIYS NNFGKFFEIT PEKNPQLRDL DIFLSSVDIN EGALLLPHFN SKAIVILVIN 

       310        320        330        340        350        360 
EGDANIELVG IKEQQQKQKQ EEEPLEVQRY RAELSEDDVF VIPAAYPFVV NATSNLNFLA 

       370        380        390        400        410        420 
FGINAENNQR NFLAGEKDNV VRQIERQVQE LAFPGSAQDV ERLLKKQRES YFVDAQPQQK 

       430 
EEGSKGRKGP FPSILGALY 

« Hide

References

[1]"Soybean beta-conglycinin genes are clustered in several DNA regions and are regulated by transcriptional and posttranscriptional processes."
Harada J.J., Barker S.J., Goldberg R.B.
Plant Cell 1:415-425(1989) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
S44893 Genomic DNA. Translation: AAB23463.1.
PIRFWSYCB. JQ0969.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1IPJX-ray2.70A/B/C24-439[»]
1IPKX-ray2.70A/B/C24-439[»]
1UIJX-ray2.50A/B/C/D/E/F24-439[»]
ProteinModelPortalP25974.
SMRP25974. Positions 26-415.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

Allergome5816. Gly m 5.
5819. Gly m 5.0301.
5820. Gly m 5.0302.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Gene expression databases

GenevestigatorP25974.

Family and domain databases

Gene3D2.60.120.10. 2 hits.
InterProIPR006045. Cupin_1.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamPF00190. Cupin_1. 2 hits.
[Graphical view]
SMARTSM00835. Cupin_1. 2 hits.
[Graphical view]
SUPFAMSSF51182. SSF51182. 2 hits.
ProtoNetSearch...

Other

EvolutionaryTraceP25974.

Entry information

Entry nameGLCB_SOYBN
AccessionPrimary (citable) accession number: P25974
Entry history
Integrated into UniProtKB/Swiss-Prot: May 1, 1992
Last sequence update: May 1, 1992
Last modified: April 16, 2014
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references