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Protein

Ribosomal RNA small subunit methyltransferase G

Gene

rsmG

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Specifically methylates the N7 position of guanine in position 535 of 16S rRNA.UniRule annotation1 Publication

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei77S-adenosyl-L-methionine; via carbonyl oxygenUniRule annotation1
Binding sitei82S-adenosyl-L-methionine; via carbonyl oxygenUniRule annotation1
Binding sitei147S-adenosyl-L-methionineUniRule annotation1

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Biological processi

rRNA processing

Keywords - Ligandi

S-adenosyl-L-methionine

Enzyme and pathway databases

BioCyciBSUB:BSU41000-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase GUniRule annotation (EC:2.1.1.-UniRule annotation)
Alternative name(s):
16S rRNA 7-methylguanosine methyltransferaseUniRule annotation
Short name:
16S rRNA m7G methyltransferaseUniRule annotation
Glucose-inhibited division protein B
Gene namesi
Name:rsmGUniRule annotation
Synonyms:gidB
Ordered Locus Names:BSU41000
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

Pathology & Biotechi

Disruption phenotypei

Low-level streptomycin resistance.1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001842151 – 239Ribosomal RNA small subunit methyltransferase GAdd BLAST239

Proteomic databases

PaxDbiP25813.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100022131.

Structurei

Secondary structure

1239
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi3 – 12Combined sources10
Helixi19 – 38Combined sources20
Helixi47 – 53Combined sources7
Helixi55 – 59Combined sources5
Helixi60 – 63Combined sources4
Helixi67 – 69Combined sources3
Beta strandi72 – 76Combined sources5
Beta strandi78 – 80Combined sources3
Helixi84 – 90Combined sources7
Beta strandi95 – 101Combined sources7
Helixi103 – 116Combined sources14
Beta strandi119 – 126Combined sources8
Helixi128 – 131Combined sources4
Turni135 – 139Combined sources5
Beta strandi141 – 147Combined sources7
Helixi152 – 159Combined sources8
Helixi160 – 162Combined sources3
Beta strandi163 – 173Combined sources11
Helixi178 – 190Combined sources13
Beta strandi193 – 202Combined sources10
Turni204 – 206Combined sources3
Beta strandi209 – 217Combined sources9
Helixi231 – 234Combined sources4

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1XDZX-ray1.60A1-239[»]
ProteinModelPortaliP25813.
SMRiP25813.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP25813.

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni128 – 129S-adenosyl-L-methionine bindingUniRule annotation2

Sequence similaritiesi

Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105D28. Bacteria.
COG0357. LUCA.
HOGENOMiHOG000221014.
InParanoidiP25813.
KOiK03501.
OMAiGVYLKHF.
PhylomeDBiP25813.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_00074. 16SrRNA_methyltr_G. 1 hit.
InterProiIPR003682. rRNA_ssu_MeTfrase_G.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF02527. GidB. 1 hit.
[Graphical view]
PIRSFiPIRSF003078. GidB. 1 hit.
SUPFAMiSSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00138. rsmG_gidB. 1 hit.

Sequencei

Sequence statusi: Complete.

P25813-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNIEEFTSGL AEKGISLSPR QLEQFELYYD MLVEWNEKIN LTSITEKKEV
60 70 80 90 100
YLKHFYDSIT AAFYVDFNQV NTICDVGAGA GFPSLPIKIC FPHLHVTIVD
110 120 130 140 150
SLNKRITFLE KLSEALQLEN TTFCHDRAET FGQRKDVRES YDIVTARAVA
160 170 180 190 200
RLSVLSELCL PLVKKNGLFV ALKAASAEEE LNAGKKAITT LGGELENIHS
210 220 230
FKLPIEESDR NIMVIRKIKN TPKKYPRKPG TPNKSPIEG
Length:239
Mass (Da):26,954
Last modified:May 1, 1992 - v1
Checksum:i525826A929B32AA9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X62539 Genomic DNA. Translation: CAA44405.1.
D26185 Genomic DNA. Translation: BAA05230.1.
AL009126 Genomic DNA. Translation: CAB16137.1.
PIRiI40441. BWBSGB.
RefSeqiNP_391980.1. NC_000964.3.
WP_003243029.1. NZ_JNCM01000034.1.

Genome annotation databases

EnsemblBacteriaiCAB16137; CAB16137; BSU41000.
GeneIDi937931.
KEGGibsu:BSU41000.
PATRICi18980302. VBIBacSub10457_4309.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X62539 Genomic DNA. Translation: CAA44405.1.
D26185 Genomic DNA. Translation: BAA05230.1.
AL009126 Genomic DNA. Translation: CAB16137.1.
PIRiI40441. BWBSGB.
RefSeqiNP_391980.1. NC_000964.3.
WP_003243029.1. NZ_JNCM01000034.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1XDZX-ray1.60A1-239[»]
ProteinModelPortaliP25813.
SMRiP25813.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100022131.

Proteomic databases

PaxDbiP25813.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB16137; CAB16137; BSU41000.
GeneIDi937931.
KEGGibsu:BSU41000.
PATRICi18980302. VBIBacSub10457_4309.

Phylogenomic databases

eggNOGiENOG4105D28. Bacteria.
COG0357. LUCA.
HOGENOMiHOG000221014.
InParanoidiP25813.
KOiK03501.
OMAiGVYLKHF.
PhylomeDBiP25813.

Enzyme and pathway databases

BioCyciBSUB:BSU41000-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP25813.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_00074. 16SrRNA_methyltr_G. 1 hit.
InterProiIPR003682. rRNA_ssu_MeTfrase_G.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF02527. GidB. 1 hit.
[Graphical view]
PIRSFiPIRSF003078. GidB. 1 hit.
SUPFAMiSSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00138. rsmG_gidB. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRSMG_BACSU
AccessioniPrimary (citable) accession number: P25813
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 1992
Last sequence update: May 1, 1992
Last modified: November 2, 2016
This is version 122 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.