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Protein

UPF0056 membrane protein YhcE

Gene

ychE

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11342-MONOMER

Protein family/group databases

TCDBi2.A.95.1.7 the 6 tms neutral amino acid transporter (naat) family

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0056 membrane protein YhcE
Gene namesi
Name:ychE
Ordered Locus Names:b1242, JW1229
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11342 ychE

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei14 – 34HelicalSequence analysisAdd BLAST21
Transmembranei54 – 74HelicalSequence analysisAdd BLAST21
Transmembranei81 – 101HelicalSequence analysisAdd BLAST21
Transmembranei120 – 140HelicalSequence analysisAdd BLAST21
Transmembranei147 – 167HelicalSequence analysisAdd BLAST21
Transmembranei189 – 209HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001569011 – 215UPF0056 membrane protein YhcEAdd BLAST215

Proteomic databases

PaxDbiP25743
PRIDEiP25743

Interactioni

Protein-protein interaction databases

BioGridi426322510 interactors.

Structurei

3D structure databases

ProteinModelPortaliP25743
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0056 (MarC) family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105EZI Bacteria
COG2095 LUCA
HOGENOMiHOG000112971
InParanoidiP25743
OMAiLFVIMDP
PhylomeDBiP25743

Family and domain databases

InterProiView protein in InterPro
IPR002771 Multi_antbiot-R_MarC
PANTHERiPTHR33508 PTHR33508, 1 hit
PfamiView protein in Pfam
PF01914 MarC, 1 hit
TIGRFAMsiTIGR00427 TIGR00427, 1 hit

Sequencei

Sequence statusi: Complete.

P25743-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIQTFFDFPV YFKFFIGLFA LVNPVGIIPV FISMTSYQTA AARNKTNLTA
60 70 80 90 100
NLSVAIILWI SLFLGDTILQ LFGISIDSFR IAGGILVVTI AMSMISGKLG
110 120 130 140 150
EDKQNKQEKS ETAVRESIGV VPLALPLMAG PGAISSTIVW GTRYHSISYL
160 170 180 190 200
FGFFVAIALF ALCCWGLFRM APWLVRVLRQ TGINVITRIM GLLLMALGIE
210
FIVTGIKGIF PGLLN
Length:215
Mass (Da):23,521
Last modified:November 1, 1997 - v2
Checksum:i82679FE8E7C8B71E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X59501 Genomic DNA Translation: CAA42090.1
U00096 Genomic DNA Translation: AAC74324.1
AP009048 Genomic DNA Translation: BAA36122.2
PIRiE64871
RefSeqiNP_415758.1, NC_000913.3
WP_000616554.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74324; AAC74324; b1242
BAA36122; BAA36122; BAA36122
GeneIDi945836
KEGGiecj:JW1229
eco:b1242
PATRICifig|1411691.4.peg.1042

Similar proteinsi

Entry informationi

Entry nameiYCHE_ECOLI
AccessioniPrimary (citable) accession number: P25743
Secondary accession number(s): P76025, Q9R7N0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 1, 1992
Last sequence update: November 1, 1997
Last modified: March 28, 2018
This is version 125 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome