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Protein

Uncharacterized protein YgbA

Gene

ygbA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11287-MONOMER.
ECOL316407:JW2702-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YgbA
Gene namesi
Name:ygbA
Ordered Locus Names:b2732, JW2702
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11287. ygbA.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 117117Uncharacterized protein YgbAPRO_0000169310Add
BLAST

Proteomic databases

PaxDbiP25728.

Interactioni

Protein-protein interaction databases

BioGridi4261422. 6 interactions.
IntActiP25728. 5 interactions.
STRINGi511145.b2732.

Structurei

3D structure databases

ProteinModelPortaliP25728.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105VXR. Bacteria.
ENOG41121K2. LUCA.
HOGENOMiHOG000271460.
InParanoidiP25728.
OMAiLTIRHLI.
OrthoDBiEOG68H8CT.

Family and domain databases

InterProiIPR020483. Uncharacterised_YgbA.
[Graphical view]
PfamiPF11756. YgbA_NO. 1 hit.
[Graphical view]
ProDomiPD075772. Uncharacterised_YgbA. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P25728-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGKRISREK LTIKKMIDLY QAKCPQASAE PEHYEALFVY AQKRLDKCVF
60 70 80 90 100
GEEKPACKQC PVHCYQPAKR EEMKQIMRWA GPRMLWRHPI LTVRHLIDDK
110
RPVPELPEKY RPKKPHE
Length:117
Mass (Da):13,940
Last modified:May 1, 1992 - v1
Checksum:i722991113DF11D18
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M64730 Genomic DNA. No translation available.
U29579 Genomic DNA. Translation: AAA69242.1.
U00096 Genomic DNA. Translation: AAC75774.1.
AP009048 Genomic DNA. Translation: BAE76809.1.
PIRiH65053.
RefSeqiNP_417212.1. NC_000913.3.
WP_000015497.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75774; AAC75774; b2732.
BAE76809; BAE76809; BAE76809.
GeneIDi947187.
KEGGiecj:JW2702.
eco:b2732.
PATRICi32120864. VBIEscCol129921_2824.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M64730 Genomic DNA. No translation available.
U29579 Genomic DNA. Translation: AAA69242.1.
U00096 Genomic DNA. Translation: AAC75774.1.
AP009048 Genomic DNA. Translation: BAE76809.1.
PIRiH65053.
RefSeqiNP_417212.1. NC_000913.3.
WP_000015497.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP25728.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261422. 6 interactions.
IntActiP25728. 5 interactions.
STRINGi511145.b2732.

Proteomic databases

PaxDbiP25728.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75774; AAC75774; b2732.
BAE76809; BAE76809; BAE76809.
GeneIDi947187.
KEGGiecj:JW2702.
eco:b2732.
PATRICi32120864. VBIEscCol129921_2824.

Organism-specific databases

EchoBASEiEB1264.
EcoGeneiEG11287. ygbA.

Phylogenomic databases

eggNOGiENOG4105VXR. Bacteria.
ENOG41121K2. LUCA.
HOGENOMiHOG000271460.
InParanoidiP25728.
OMAiLTIRHLI.
OrthoDBiEOG68H8CT.

Enzyme and pathway databases

BioCyciEcoCyc:EG11287-MONOMER.
ECOL316407:JW2702-MONOMER.

Miscellaneous databases

PROiP25728.

Family and domain databases

InterProiIPR020483. Uncharacterised_YgbA.
[Graphical view]
PfamiPF11756. YgbA_NO. 1 hit.
[Graphical view]
ProDomiPD075772. Uncharacterised_YgbA. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The Escherichia coli fdv gene probably encodes mutS and is located at minute 58.8 adjacent to the hyc-hyp gene cluster."
    Schlensog V., Boeck A.
    J. Bacteriol. 173:7414-7415(1991) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYGBA_ECOLI
AccessioniPrimary (citable) accession number: P25728
Secondary accession number(s): Q2MA97
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 1992
Last sequence update: May 1, 1992
Last modified: January 20, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.