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P25697

- KPPR_ARATH

UniProt

P25697 - KPPR_ARATH

Protein

Phosphoribulokinase, chloroplastic

Gene

At1g32060

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 5 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 112 (01 Oct 2014)
      Sequence version 1 (01 May 1992)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + D-ribulose 5-phosphate = ADP + D-ribulose 1,5-bisphosphate.

    Enzyme regulationi

    Light regulated via thioredoxin by reversible oxidation/reduction of sulfhydryl/disulfide groups.

    Pathwayi

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. phosphoribulokinase activity Source: UniProtKB-EC
    3. protein binding Source: TAIR

    GO - Biological processi

    1. defense response to bacterium Source: TAIR
    2. reductive pentose-phosphate cycle Source: UniProtKB-UniPathway
    3. response to cold Source: TAIR

    Keywords - Molecular functioni

    Kinase, Transferase

    Keywords - Biological processi

    Calvin cycle, Photosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciARA:AT1G32060-MONOMER.
    MetaCyc:AT1G32060-MONOMER.
    UniPathwayiUPA00116.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoribulokinase, chloroplastic (EC:2.7.1.19)
    Short name:
    PRK
    Short name:
    PRKase
    Alternative name(s):
    Phosphopentokinase
    Gene namesi
    Ordered Locus Names:At1g32060
    ORF Names:T12O21.4
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 1

    Organism-specific databases

    TAIRiAT1G32060.

    Subcellular locationi

    GO - Cellular componenti

    1. apoplast Source: TAIR
    2. chloroplast Source: TAIR
    3. chloroplast envelope Source: TAIR
    4. chloroplast stroma Source: TAIR
    5. chloroplast thylakoid membrane Source: TAIR
    6. membrane Source: TAIR
    7. stromule Source: TAIR
    8. thylakoid Source: TAIR

    Keywords - Cellular componenti

    Chloroplast, Plastid

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transit peptidei1 – 4646ChloroplastAdd
    BLAST
    Chaini47 – 395349Phosphoribulokinase, chloroplasticPRO_0000025751Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Disulfide bondi61 ↔ 100By similarity

    Keywords - PTMi

    Disulfide bond

    Proteomic databases

    PaxDbiP25697.
    PRIDEiP25697.

    2D gel databases

    SWISS-2DPAGEP25697.
    World-2DPAGE0003:P25697.

    Expressioni

    Gene expression databases

    GenevestigatoriP25697.

    Interactioni

    Protein-protein interaction databases

    BioGridi25332. 3 interactions.
    IntActiP25697. 2 interactions.
    STRINGi3702.AT1G32060.1-P.

    Structurei

    3D structure databases

    ProteinModelPortaliP25697.
    SMRiP25697. Positions 47-242.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the phosphoribulokinase family.Curated

    Keywords - Domaini

    Transit peptide

    Phylogenomic databases

    eggNOGiCOG0572.
    HOGENOMiHOG000230117.
    InParanoidiP25697.
    KOiK00855.
    OMAiMKPIYNH.
    PhylomeDBiP25697.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    InterProiIPR027417. P-loop_NTPase.
    IPR006082. PRK.
    IPR006083. PRK/URK.
    [Graphical view]
    PfamiPF00485. PRK. 1 hit.
    [Graphical view]
    PRINTSiPR00478. PHRIBLKINASE.
    SUPFAMiSSF52540. SSF52540. 1 hit.
    PROSITEiPS00567. PHOSPHORIBULOKINASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P25697-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAVSTIYSTQ ALNSTHFLTS SSSSKQVFLY RRQPQTNRRF NTLITCAQET    50
    IVIGLAADSG CGKSTFMRRL TSVFGGAAKP PKGGNPDSNT LISDTTTVIC 100
    LDDYHSLDRY GRKEQKVTAL DPRANDFDLM YEQVKALKNG IAVEKPIYNH 150
    VTGLLDPPEL IQPPKILVIE GLHPMFDERV RDLLDFSIYL DISNEVKFAW 200
    KIQRDMAERG HSLESIKASI EARKPDFDAF IDPQKQYADA VIEVLPTTLI 250
    PDDNEGKVLR VRLIMKEGVK YFSPVYLFDE GSTISWIPCG RKLTCSYPGI 300
    KFNYEPDSYF DHEVSVLEMD GQFDRLDELI YVESHLSNLS TKFYGEVTQQ 350
    MLKHADFPGS NNGTGLFQTI VGLKIRDLYE QLIANKATAR AEAKA 395
    Length:395
    Mass (Da):44,464
    Last modified:May 1, 1992 - v1
    Checksum:i4660A92EF7E39BC6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X58149 mRNA. Translation: CAA41155.1.
    AC074309 Genomic DNA. Translation: AAG50797.1.
    CP002684 Genomic DNA. Translation: AEE31430.1.
    AY044335 mRNA. Translation: AAK73276.1.
    AY128355 mRNA. Translation: AAM91558.1.
    BT000019 mRNA. Translation: AAN15338.1.
    AY084576 mRNA. Translation: AAM61142.1.
    PIRiS16583.
    RefSeqiNP_174486.1. NM_102940.5.
    UniGeneiAt.22659.

    Genome annotation databases

    EnsemblPlantsiAT1G32060.1; AT1G32060.1; AT1G32060.
    GeneIDi840098.
    KEGGiath:AT1G32060.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X58149 mRNA. Translation: CAA41155.1 .
    AC074309 Genomic DNA. Translation: AAG50797.1 .
    CP002684 Genomic DNA. Translation: AEE31430.1 .
    AY044335 mRNA. Translation: AAK73276.1 .
    AY128355 mRNA. Translation: AAM91558.1 .
    BT000019 mRNA. Translation: AAN15338.1 .
    AY084576 mRNA. Translation: AAM61142.1 .
    PIRi S16583.
    RefSeqi NP_174486.1. NM_102940.5.
    UniGenei At.22659.

    3D structure databases

    ProteinModelPortali P25697.
    SMRi P25697. Positions 47-242.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 25332. 3 interactions.
    IntActi P25697. 2 interactions.
    STRINGi 3702.AT1G32060.1-P.

    2D gel databases

    SWISS-2DPAGE P25697.
    World-2DPAGE 0003:P25697.

    Proteomic databases

    PaxDbi P25697.
    PRIDEi P25697.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT1G32060.1 ; AT1G32060.1 ; AT1G32060 .
    GeneIDi 840098.
    KEGGi ath:AT1G32060.

    Organism-specific databases

    TAIRi AT1G32060.

    Phylogenomic databases

    eggNOGi COG0572.
    HOGENOMi HOG000230117.
    InParanoidi P25697.
    KOi K00855.
    OMAi MKPIYNH.
    PhylomeDBi P25697.

    Enzyme and pathway databases

    UniPathwayi UPA00116 .
    BioCyci ARA:AT1G32060-MONOMER.
    MetaCyc:AT1G32060-MONOMER.

    Gene expression databases

    Genevestigatori P25697.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    InterProi IPR027417. P-loop_NTPase.
    IPR006082. PRK.
    IPR006083. PRK/URK.
    [Graphical view ]
    Pfami PF00485. PRK. 1 hit.
    [Graphical view ]
    PRINTSi PR00478. PHRIBLKINASE.
    SUPFAMi SSF52540. SSF52540. 1 hit.
    PROSITEi PS00567. PHOSPHORIBULOKINASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Nucleotide sequence of a cDNA clone encoding chloroplast phosphoribulokinase from Arabidopsis thaliana."
      Horsnell P.R., Raines C.A.
      Plant Mol. Biol. 17:183-184(1991) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: cv. C24.
    2. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
      Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
      , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
      Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    3. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    4. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
      Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
      , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
      Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Columbia.
    5. "Full-length cDNA from Arabidopsis thaliana."
      Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A.
      Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

    Entry informationi

    Entry nameiKPPR_ARATH
    AccessioniPrimary (citable) accession number: P25697
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 1, 1992
    Last sequence update: May 1, 1992
    Last modified: October 1, 2014
    This is version 112 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3