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P25654

- YCY0_YEAST

UniProt

P25654 - YCY0_YEAST

Protein

UPF0587 protein YCR090C

Gene

YCR090C

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 92 (01 Oct 2014)
      Sequence version 1 (01 May 1992)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    BioCyciYEAST:G3O-29384-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    UPF0587 protein YCR090C
    Gene namesi
    Ordered Locus Names:YCR090C
    ORF Names:YCR1104, YCR90C
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome III

    Organism-specific databases

    CYGDiYCR090c.
    SGDiS000000686. YCR090C.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 182182UPF0587 protein YCR090CPRO_0000202580Add
    BLAST

    Proteomic databases

    MaxQBiP25654.
    PaxDbiP25654.
    PeptideAtlasiP25654.

    Expressioni

    Gene expression databases

    GenevestigatoriP25654.

    Interactioni

    Protein-protein interaction databases

    BioGridi31062. 39 interactions.
    MINTiMINT-2493233.
    STRINGi4932.YCR090C.

    Structurei

    3D structure databases

    ProteinModelPortaliP25654.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the UPF0587 family.Curated

    Phylogenomic databases

    eggNOGiNOG284952.
    HOGENOMiHOG000167115.
    OMAiNEWYDYD.
    OrthoDBiEOG7QK0QB.

    Family and domain databases

    InterProiIPR008584. DUF866_euk.
    [Graphical view]
    PANTHERiPTHR12857. PTHR12857. 1 hit.
    PfamiPF05907. DUF866. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P25654-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPLFLVLKAT LSENVTKVSI ENTNESRAEF AFDLQCTSCR ELHDSKVIIN    50
    TFEEYAMPAS KGTASFLMKC KFCSKELSVN LCAFEDEYLT DQSDDKWAKI 100
    KDVRKKHGLS KVKEDSFIPL SLDCRGCELI KFYPDTITFE VSLSSGKVMS 150
    CQLEDNEWYD YDDNLGEEVT MTDFSSSIIK GK 182
    Length:182
    Mass (Da):20,704
    Last modified:May 1, 1992 - v1
    Checksum:iBF03D05179E74483
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X59720 Genomic DNA. Translation: CAA42255.1.
    AY558154 Genomic DNA. Translation: AAS56480.1.
    BK006937 Genomic DNA. Translation: DAA07559.1.
    PIRiS19506.
    RefSeqiNP_010014.1. NM_001178796.1.

    Genome annotation databases

    EnsemblFungiiYCR090C; YCR090C; YCR090C.
    GeneIDi850452.
    KEGGisce:YCR090C.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X59720 Genomic DNA. Translation: CAA42255.1 .
    AY558154 Genomic DNA. Translation: AAS56480.1 .
    BK006937 Genomic DNA. Translation: DAA07559.1 .
    PIRi S19506.
    RefSeqi NP_010014.1. NM_001178796.1.

    3D structure databases

    ProteinModelPortali P25654.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 31062. 39 interactions.
    MINTi MINT-2493233.
    STRINGi 4932.YCR090C.

    Proteomic databases

    MaxQBi P25654.
    PaxDbi P25654.
    PeptideAtlasi P25654.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii YCR090C ; YCR090C ; YCR090C .
    GeneIDi 850452.
    KEGGi sce:YCR090C.

    Organism-specific databases

    CYGDi YCR090c.
    SGDi S000000686. YCR090C.

    Phylogenomic databases

    eggNOGi NOG284952.
    HOGENOMi HOG000167115.
    OMAi NEWYDYD.
    OrthoDBi EOG7QK0QB.

    Enzyme and pathway databases

    BioCyci YEAST:G3O-29384-MONOMER.

    Miscellaneous databases

    NextBioi 966072.

    Gene expression databases

    Genevestigatori P25654.

    Family and domain databases

    InterProi IPR008584. DUF866_euk.
    [Graphical view ]
    PANTHERi PTHR12857. PTHR12857. 1 hit.
    Pfami PF05907. DUF866. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The complete sequence of a 6146 bp fragment of Saccharomyces cerevisiae chromosome III contains two new open reading frames."
      Wilson C., Grisanti P., Frontali L.
      Yeast 8:569-575(1992) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "The complete DNA sequence of yeast chromosome III."
      Oliver S.G., van der Aart Q.J.M., Agostoni-Carbone M.L., Aigle M., Alberghina L., Alexandraki D., Antoine G., Anwar R., Ballesta J.P.G., Benit P., Berben G., Bergantino E., Biteau N., Bolle P.-A., Bolotin-Fukuhara M., Brown A., Brown A.J.P., Buhler J.-M.
      , Carcano C., Carignani G., Cederberg H., Chanet R., Contreras R., Crouzet M., Daignan-Fornier B., Defoor E., Delgado M.D., Demolder J., Doira C., Dubois E., Dujon B., Duesterhoeft A., Erdmann D., Esteban M., Fabre F., Fairhead C., Faye G., Feldmann H., Fiers W., Francingues-Gaillard M.-C., Franco L., Frontali L., Fukuhara H., Fuller L.J., Galland P., Gent M.E., Gigot D., Gilliquet V., Glansdorff N., Goffeau A., Grenson M., Grisanti P., Grivell L.A., de Haan M., Haasemann M., Hatat D., Hoenicka J., Hegemann J.H., Herbert C.J., Hilger F., Hohmann S., Hollenberg C.P., Huse K., Iborra F., Indge K.J., Isono K., Jacq C., Jacquet M., James C.M., Jauniaux J.-C., Jia Y., Jimenez A., Kelly A., Kleinhans U., Kreisl P., Lanfranchi G., Lewis C., van der Linden C.G., Lucchini G., Lutzenkirchen K., Maat M.J., Mallet L., Mannhaupt G., Martegani E., Mathieu A., Maurer C.T.C., McConnell D., McKee R.A., Messenguy F., Mewes H.-W., Molemans F., Montague M.A., Muzi Falconi M., Navas L., Newlon C.S., Noone D., Pallier C., Panzeri L., Pearson B.M., Perea J., Philippsen P., Pierard A., Planta R.J., Plevani P., Poetsch B., Pohl F.M., Purnelle B., Ramezani Rad M., Rasmussen S.W., Raynal A., Remacha M.A., Richterich P., Roberts A.B., Rodriguez F., Sanz E., Schaaff-Gerstenschlaeger I., Scherens B., Schweitzer B., Shu Y., Skala J., Slonimski P.P., Sor F., Soustelle C., Spiegelberg R., Stateva L.I., Steensma H.Y., Steiner S., Thierry A., Thireos G., Tzermia M., Urrestarazu L.A., Valle G., Vetter I., van Vliet-Reedijk J.C., Voet M., Volckaert G., Vreken P., Wang H., Warmington J.R., von Wettstein D., Wicksteed B.L., Wilson C., Wurst H., Xu G., Yoshikawa A., Zimmermann F.K., Sgouros J.G.
      Nature 357:38-46(1992) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    3. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.
    4. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    5. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].

    Entry informationi

    Entry nameiYCY0_YEAST
    AccessioniPrimary (citable) accession number: P25654
    Secondary accession number(s): D6VR90
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 1, 1992
    Last sequence update: May 1, 1992
    Last modified: October 1, 2014
    This is version 92 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Present with 3970 molecules/cell in log phase SD medium.1 Publication

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families
    2. Uncharacterized protein families (UPF)
      List of uncharacterized protein family (UPF) entries
    3. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    4. Yeast chromosome III
      Yeast (Saccharomyces cerevisiae) chromosome III: entries and gene names

    External Data

    Dasty 3