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Protein

UPF0587 protein YCR090C

Gene

YCR090C

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciYEAST:G3O-29384-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0587 protein YCR090C
Gene namesi
Ordered Locus Names:YCR090C
ORF Names:YCR1104, YCR90C
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome III

Organism-specific databases

CYGDiYCR090c.
SGDiS000000686. YCR090C.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 182182UPF0587 protein YCR090CPRO_0000202580Add
BLAST

Proteomic databases

MaxQBiP25654.
PaxDbiP25654.
PeptideAtlasiP25654.

Expressioni

Gene expression databases

GenevestigatoriP25654.

Interactioni

Protein-protein interaction databases

BioGridi31062. 40 interactions.
MINTiMINT-2493233.
STRINGi4932.YCR090C.

Structurei

3D structure databases

ProteinModelPortaliP25654.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0587 family.Curated

Phylogenomic databases

eggNOGiNOG284952.
HOGENOMiHOG000167115.
InParanoidiP25654.
OMAiVFRCKEC.
OrthoDBiEOG7QK0QB.

Family and domain databases

InterProiIPR008584. DUF866_euk.
[Graphical view]
PANTHERiPTHR12857. PTHR12857. 1 hit.
PfamiPF05907. DUF866. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P25654-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPLFLVLKAT LSENVTKVSI ENTNESRAEF AFDLQCTSCR ELHDSKVIIN
60 70 80 90 100
TFEEYAMPAS KGTASFLMKC KFCSKELSVN LCAFEDEYLT DQSDDKWAKI
110 120 130 140 150
KDVRKKHGLS KVKEDSFIPL SLDCRGCELI KFYPDTITFE VSLSSGKVMS
160 170 180
CQLEDNEWYD YDDNLGEEVT MTDFSSSIIK GK
Length:182
Mass (Da):20,704
Last modified:May 1, 1992 - v1
Checksum:iBF03D05179E74483
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X59720 Genomic DNA. Translation: CAA42255.1.
AY558154 Genomic DNA. Translation: AAS56480.1.
BK006937 Genomic DNA. Translation: DAA07559.1.
PIRiS19506.
RefSeqiNP_010014.1. NM_001178796.1.

Genome annotation databases

EnsemblFungiiYCR090C; YCR090C; YCR090C.
GeneIDi850452.
KEGGisce:YCR090C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X59720 Genomic DNA. Translation: CAA42255.1.
AY558154 Genomic DNA. Translation: AAS56480.1.
BK006937 Genomic DNA. Translation: DAA07559.1.
PIRiS19506.
RefSeqiNP_010014.1. NM_001178796.1.

3D structure databases

ProteinModelPortaliP25654.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi31062. 40 interactions.
MINTiMINT-2493233.
STRINGi4932.YCR090C.

Proteomic databases

MaxQBiP25654.
PaxDbiP25654.
PeptideAtlasiP25654.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYCR090C; YCR090C; YCR090C.
GeneIDi850452.
KEGGisce:YCR090C.

Organism-specific databases

CYGDiYCR090c.
SGDiS000000686. YCR090C.

Phylogenomic databases

eggNOGiNOG284952.
HOGENOMiHOG000167115.
InParanoidiP25654.
OMAiVFRCKEC.
OrthoDBiEOG7QK0QB.

Enzyme and pathway databases

BioCyciYEAST:G3O-29384-MONOMER.

Miscellaneous databases

NextBioi966072.

Gene expression databases

GenevestigatoriP25654.

Family and domain databases

InterProiIPR008584. DUF866_euk.
[Graphical view]
PANTHERiPTHR12857. PTHR12857. 1 hit.
PfamiPF05907. DUF866. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The complete sequence of a 6146 bp fragment of Saccharomyces cerevisiae chromosome III contains two new open reading frames."
    Wilson C., Grisanti P., Frontali L.
    Yeast 8:569-575(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "The complete DNA sequence of yeast chromosome III."
    Oliver S.G., van der Aart Q.J.M., Agostoni-Carbone M.L., Aigle M., Alberghina L., Alexandraki D., Antoine G., Anwar R., Ballesta J.P.G., Benit P., Berben G., Bergantino E., Biteau N., Bolle P.-A., Bolotin-Fukuhara M., Brown A., Brown A.J.P., Buhler J.-M.
    , Carcano C., Carignani G., Cederberg H., Chanet R., Contreras R., Crouzet M., Daignan-Fornier B., Defoor E., Delgado M.D., Demolder J., Doira C., Dubois E., Dujon B., Duesterhoeft A., Erdmann D., Esteban M., Fabre F., Fairhead C., Faye G., Feldmann H., Fiers W., Francingues-Gaillard M.-C., Franco L., Frontali L., Fukuhara H., Fuller L.J., Galland P., Gent M.E., Gigot D., Gilliquet V., Glansdorff N., Goffeau A., Grenson M., Grisanti P., Grivell L.A., de Haan M., Haasemann M., Hatat D., Hoenicka J., Hegemann J.H., Herbert C.J., Hilger F., Hohmann S., Hollenberg C.P., Huse K., Iborra F., Indge K.J., Isono K., Jacq C., Jacquet M., James C.M., Jauniaux J.-C., Jia Y., Jimenez A., Kelly A., Kleinhans U., Kreisl P., Lanfranchi G., Lewis C., van der Linden C.G., Lucchini G., Lutzenkirchen K., Maat M.J., Mallet L., Mannhaupt G., Martegani E., Mathieu A., Maurer C.T.C., McConnell D., McKee R.A., Messenguy F., Mewes H.-W., Molemans F., Montague M.A., Muzi Falconi M., Navas L., Newlon C.S., Noone D., Pallier C., Panzeri L., Pearson B.M., Perea J., Philippsen P., Pierard A., Planta R.J., Plevani P., Poetsch B., Pohl F.M., Purnelle B., Ramezani Rad M., Rasmussen S.W., Raynal A., Remacha M.A., Richterich P., Roberts A.B., Rodriguez F., Sanz E., Schaaff-Gerstenschlaeger I., Scherens B., Schweitzer B., Shu Y., Skala J., Slonimski P.P., Sor F., Soustelle C., Spiegelberg R., Stateva L.I., Steensma H.Y., Steiner S., Thierry A., Thireos G., Tzermia M., Urrestarazu L.A., Valle G., Vetter I., van Vliet-Reedijk J.C., Voet M., Volckaert G., Vreken P., Wang H., Warmington J.R., von Wettstein D., Wicksteed B.L., Wilson C., Wurst H., Xu G., Yoshikawa A., Zimmermann F.K., Sgouros J.G.
    Nature 357:38-46(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  3. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  4. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  5. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiYCY0_YEAST
AccessioniPrimary (citable) accession number: P25654
Secondary accession number(s): D6VR90
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 1992
Last sequence update: May 1, 1992
Last modified: January 7, 2015
This is version 94 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 3970 molecules/cell in log phase SD medium.1 Publication

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries
  3. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  4. Yeast chromosome III
    Yeast (Saccharomyces cerevisiae) chromosome III: entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.