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P25642

- IMG2_YEAST

UniProt

P25642 - IMG2_YEAST

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Protein

54S ribosomal protein IMG2, mitochondrial

Gene

IMG2

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: SGD

GO - Biological processi

  1. mitochondrial translation Source: SGD
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciYEAST:G3O-29371-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
54S ribosomal protein IMG2, mitochondrial
Alternative name(s):
Integrity of mitochondrial genome protein 2
Gene namesi
Name:IMG2
Ordered Locus Names:YCR071C
ORF Names:YCR71C
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome III

Organism-specific databases

CYGDiYCR071c.
SGDiS000000667. IMG2.

Subcellular locationi

Mitochondrion 2 Publications

GO - Cellular componenti

  1. mitochondrial large ribosomal subunit Source: SGD
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 3838MitochondrionSequence AnalysisAdd
BLAST
Chaini39 – 14610854S ribosomal protein IMG2, mitochondrialPRO_0000030537Add
BLAST

Proteomic databases

MaxQBiP25642.
PaxDbiP25642.

Expressioni

Gene expression databases

GenevestigatoriP25642.

Interactioni

Subunit structurei

Component of the mitochondrial large ribosomal subunit. Mature mitochondrial ribosomes consist of a small (37S) and a large (54S) subunit. The 37S subunit contains at least 33 different proteins and 1 molecule of RNA (15S). The 54S subunit contains at least 45 different proteins and 1 molecule of RNA (21S).1 Publication

Protein-protein interaction databases

BioGridi31046. 46 interactions.
DIPiDIP-6696N.
IntActiP25642. 6 interactions.
MINTiMINT-635020.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1VW4electron microscopy3.2071-146[»]
ProteinModelPortaliP25642.
SMRiP25642. Positions 41-146.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L49em family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiNOG329098.
HOGENOMiHOG000000907.
InParanoidiP25642.
KOiK17430.
OMAiNNEFIAY.
OrthoDBiEOG7CRV2N.

Family and domain databases

InterProiIPR007740. Ribosomal_L49/IMG2.
[Graphical view]
PANTHERiPTHR13477. PTHR13477. 1 hit.
PfamiPF05046. Img2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P25642-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MISSCVTRCF GRGKCLPGPA TASIYQTIRC ISTNSNKAAE APIFPKLEDV
60 70 80 90 100
KMHELIGNNN FGKKTYYVER SRTGNLPVYS AYKNGGNKII TEIRKIEGDV
110 120 130 140
IQLRNDLQEQ LPFIPKKSWS VVMQSKKIII KGNAVEAVKR VLTKKF
Length:146
Mass (Da):16,380
Last modified:May 16, 2003 - v2
Checksum:i0A703005418F783F
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti120 – 1212SV → LW in AAT92839. (PubMed:17322287)Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X59720 Genomic DNA. Translation: CAC42988.1.
AY692820 Genomic DNA. Translation: AAT92839.1.
BK006937 Genomic DNA. Translation: DAA07542.1.
PIRiS19486.
RefSeqiNP_009996.2. NM_001178781.1.

Genome annotation databases

EnsemblFungiiYCR071C; YCR071C; YCR071C.
GeneIDi850434.
KEGGisce:YCR071C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X59720 Genomic DNA. Translation: CAC42988.1 .
AY692820 Genomic DNA. Translation: AAT92839.1 .
BK006937 Genomic DNA. Translation: DAA07542.1 .
PIRi S19486.
RefSeqi NP_009996.2. NM_001178781.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1VW4 electron microscopy 3.20 7 1-146 [» ]
ProteinModelPortali P25642.
SMRi P25642. Positions 41-146.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 31046. 46 interactions.
DIPi DIP-6696N.
IntActi P25642. 6 interactions.
MINTi MINT-635020.

Proteomic databases

MaxQBi P25642.
PaxDbi P25642.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii YCR071C ; YCR071C ; YCR071C .
GeneIDi 850434.
KEGGi sce:YCR071C.

Organism-specific databases

CYGDi YCR071c.
SGDi S000000667. IMG2.

Phylogenomic databases

eggNOGi NOG329098.
HOGENOMi HOG000000907.
InParanoidi P25642.
KOi K17430.
OMAi NNEFIAY.
OrthoDBi EOG7CRV2N.

Enzyme and pathway databases

BioCyci YEAST:G3O-29371-MONOMER.

Miscellaneous databases

NextBioi 966024.
PROi P25642.

Gene expression databases

Genevestigatori P25642.

Family and domain databases

InterProi IPR007740. Ribosomal_L49/IMG2.
[Graphical view ]
PANTHERi PTHR13477. PTHR13477. 1 hit.
Pfami PF05046. Img2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The complete DNA sequence of yeast chromosome III."
    Oliver S.G., van der Aart Q.J.M., Agostoni-Carbone M.L., Aigle M., Alberghina L., Alexandraki D., Antoine G., Anwar R., Ballesta J.P.G., Benit P., Berben G., Bergantino E., Biteau N., Bolle P.-A., Bolotin-Fukuhara M., Brown A., Brown A.J.P., Buhler J.-M.
    , Carcano C., Carignani G., Cederberg H., Chanet R., Contreras R., Crouzet M., Daignan-Fornier B., Defoor E., Delgado M.D., Demolder J., Doira C., Dubois E., Dujon B., Duesterhoeft A., Erdmann D., Esteban M., Fabre F., Fairhead C., Faye G., Feldmann H., Fiers W., Francingues-Gaillard M.-C., Franco L., Frontali L., Fukuhara H., Fuller L.J., Galland P., Gent M.E., Gigot D., Gilliquet V., Glansdorff N., Goffeau A., Grenson M., Grisanti P., Grivell L.A., de Haan M., Haasemann M., Hatat D., Hoenicka J., Hegemann J.H., Herbert C.J., Hilger F., Hohmann S., Hollenberg C.P., Huse K., Iborra F., Indge K.J., Isono K., Jacq C., Jacquet M., James C.M., Jauniaux J.-C., Jia Y., Jimenez A., Kelly A., Kleinhans U., Kreisl P., Lanfranchi G., Lewis C., van der Linden C.G., Lucchini G., Lutzenkirchen K., Maat M.J., Mallet L., Mannhaupt G., Martegani E., Mathieu A., Maurer C.T.C., McConnell D., McKee R.A., Messenguy F., Mewes H.-W., Molemans F., Montague M.A., Muzi Falconi M., Navas L., Newlon C.S., Noone D., Pallier C., Panzeri L., Pearson B.M., Perea J., Philippsen P., Pierard A., Planta R.J., Plevani P., Poetsch B., Pohl F.M., Purnelle B., Ramezani Rad M., Rasmussen S.W., Raynal A., Remacha M.A., Richterich P., Roberts A.B., Rodriguez F., Sanz E., Schaaff-Gerstenschlaeger I., Scherens B., Schweitzer B., Shu Y., Skala J., Slonimski P.P., Sor F., Soustelle C., Spiegelberg R., Stateva L.I., Steensma H.Y., Steiner S., Thierry A., Thireos G., Tzermia M., Urrestarazu L.A., Valle G., Vetter I., van Vliet-Reedijk J.C., Voet M., Volckaert G., Vreken P., Wang H., Warmington J.R., von Wettstein D., Wicksteed B.L., Wilson C., Wurst H., Xu G., Yoshikawa A., Zimmermann F.K., Sgouros J.G.
    Nature 357:38-46(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  3. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-121.
    Strain: ATCC 204508 / S288c.
  4. "Tag-mediated isolation of yeast mitochondrial ribosome and mass spectrometric identification of its new components."
    Gan X., Kitakawa M., Yoshino K., Oshiro N., Yonezawa K., Isono K.
    Eur. J. Biochem. 269:5203-5214(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION IN THE MITOCHONDRIAL RIBOSOMAL LARGE COMPLEX, IDENTIFICATION BY MASS SPECTROMETRY.
  5. Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
  6. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
  7. Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
    Strain: ATCC 76625 / YPH499.

Entry informationi

Entry nameiIMG2_YEAST
AccessioniPrimary (citable) accession number: P25642
Secondary accession number(s): D6VR73, Q6B2B0, Q96VG7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 1992
Last sequence update: May 16, 2003
Last modified: October 29, 2014
This is version 109 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 1700 molecules/cell in log phase SD medium.1 Publication

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families
  4. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  5. Yeast chromosome III
    Yeast (Saccharomyces cerevisiae) chromosome III: entries and gene names

External Data

Dasty 3