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P25601

- YCH5_YEAST

UniProt

P25601 - YCH5_YEAST

Protein

Putative transposon Ty5-1 protein YCL075W

Gene

TY5B

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 2 out of 5- Protein uncertaini
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    • History
      Entry version 66 (01 Oct 2014)
      Sequence version 1 (01 May 1992)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA-directed DNA polymerase activity Source: SGD
    2. peptidase activity Source: SGD
    3. ribonuclease activity Source: SGD
    4. RNA binding Source: SGD
    5. RNA-directed DNA polymerase activity Source: SGD

    GO - Biological processi

    1. DNA-dependent DNA replication Source: GOC
    2. proteolysis Source: GOC
    3. RNA-dependent DNA replication Source: GOC
    4. RNA phosphodiester bond hydrolysis Source: GOC
    5. transposition, RNA-mediated Source: SGD

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative transposon Ty5-1 protein YCL075W
    Gene namesi
    Name:TY5B
    Ordered Locus Names:YCL075W
    ORF Names:YCL75W
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome III

    Organism-specific databases

    SGDiS000000580. YCL075W.

    Subcellular locationi

    GO - Cellular componenti

    1. retrotransposon nucleocapsid Source: SGD

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 146146Putative transposon Ty5-1 protein YCL075WPRO_0000203504Add
    BLAST

    Expressioni

    Gene expression databases

    GenevestigatoriP25601.

    Interactioni

    Protein-protein interaction databases

    IntActiP25601. 1 interaction.

    Structurei

    3D structure databases

    ProteinModelPortaliP25601.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    OrthoDBiEOG7PK9BD.

    Sequencei

    Sequence statusi: Complete.

    P25601-1 [UniParc]FASTAAdd to Basket

    « Hide

    MYIIYGADHR ISNCSLLKRR IPEARIFKLY PNDKTSRSSS ASVAIPDYET    50
    QGQTAGQITP KSWLCMLSST VPATKSSEWI FDTGCTSHMC HDRSIFSSFT 100
    RSSRKDFVRG VGGSIPIMGS GTVNIGTVQL HDVSYVPDLP VNLISV 146
    Length:146
    Mass (Da):16,049
    Last modified:May 1, 1992 - v1
    Checksum:i9CB076BA872E2756
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X59720 Genomic DNA. No translation available.
    AY558370 Genomic DNA. Translation: AAS56696.1.
    BK006937 Genomic DNA. No translation available.
    PIRiS19407.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X59720 Genomic DNA. No translation available.
    AY558370 Genomic DNA. Translation: AAS56696.1 .
    BK006937 Genomic DNA. No translation available.
    PIRi S19407.

    3D structure databases

    ProteinModelPortali P25601.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi P25601. 1 interaction.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    SGDi S000000580. YCL075W.

    Phylogenomic databases

    OrthoDBi EOG7PK9BD.

    Gene expression databases

    Genevestigatori P25601.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "The complete DNA sequence of yeast chromosome III."
      Oliver S.G., van der Aart Q.J.M., Agostoni-Carbone M.L., Aigle M., Alberghina L., Alexandraki D., Antoine G., Anwar R., Ballesta J.P.G., Benit P., Berben G., Bergantino E., Biteau N., Bolle P.-A., Bolotin-Fukuhara M., Brown A., Brown A.J.P., Buhler J.-M.
      , Carcano C., Carignani G., Cederberg H., Chanet R., Contreras R., Crouzet M., Daignan-Fornier B., Defoor E., Delgado M.D., Demolder J., Doira C., Dubois E., Dujon B., Duesterhoeft A., Erdmann D., Esteban M., Fabre F., Fairhead C., Faye G., Feldmann H., Fiers W., Francingues-Gaillard M.-C., Franco L., Frontali L., Fukuhara H., Fuller L.J., Galland P., Gent M.E., Gigot D., Gilliquet V., Glansdorff N., Goffeau A., Grenson M., Grisanti P., Grivell L.A., de Haan M., Haasemann M., Hatat D., Hoenicka J., Hegemann J.H., Herbert C.J., Hilger F., Hohmann S., Hollenberg C.P., Huse K., Iborra F., Indge K.J., Isono K., Jacq C., Jacquet M., James C.M., Jauniaux J.-C., Jia Y., Jimenez A., Kelly A., Kleinhans U., Kreisl P., Lanfranchi G., Lewis C., van der Linden C.G., Lucchini G., Lutzenkirchen K., Maat M.J., Mallet L., Mannhaupt G., Martegani E., Mathieu A., Maurer C.T.C., McConnell D., McKee R.A., Messenguy F., Mewes H.-W., Molemans F., Montague M.A., Muzi Falconi M., Navas L., Newlon C.S., Noone D., Pallier C., Panzeri L., Pearson B.M., Perea J., Philippsen P., Pierard A., Planta R.J., Plevani P., Poetsch B., Pohl F.M., Purnelle B., Ramezani Rad M., Rasmussen S.W., Raynal A., Remacha M.A., Richterich P., Roberts A.B., Rodriguez F., Sanz E., Schaaff-Gerstenschlaeger I., Scherens B., Schweitzer B., Shu Y., Skala J., Slonimski P.P., Sor F., Soustelle C., Spiegelberg R., Stateva L.I., Steensma H.Y., Steiner S., Thierry A., Thireos G., Tzermia M., Urrestarazu L.A., Valle G., Vetter I., van Vliet-Reedijk J.C., Voet M., Volckaert G., Vreken P., Wang H., Warmington J.R., von Wettstein D., Wicksteed B.L., Wilson C., Wurst H., Xu G., Yoshikawa A., Zimmermann F.K., Sgouros J.G.
      Nature 357:38-46(1992) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    2. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.
    3. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    4. Cited for: IDENTIFICATION AS PART OF TRANSPOSON TY5-1.

    Entry informationi

    Entry nameiYCH5_YEAST
    AccessioniPrimary (citable) accession number: P25601
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 1, 1992
    Last sequence update: May 1, 1992
    Last modified: October 1, 2014
    This is version 66 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Caution

    Could be the product of a pseudogene. This is a truncated part of a POL protein in the mutated, non-functional YCLWTy5-1 transposon.Curated

    Keywords - Technical termi

    Complete proteome, Reference proteome, Transposable element

    Documents

    1. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    2. Yeast chromosome III
      Yeast (Saccharomyces cerevisiae) chromosome III: entries and gene names

    External Data

    Dasty 3