P25600 (YCH4_YEAST) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative transposon Ty5-1 protein YCL074W

Gene names

Name:	TY5A
Ordered Locus Names:	YCL074W
ORF Names:	YCL74W

Organism

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]

Taxonomic identifier

559292 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Ascomycota › saccharomyceta › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces › Saccharomyces cerevisiae

Protein attributes

Sequence length	308 AA.
Sequence status	Complete.
Protein existence	Uncertain

General annotation (Comments)

Caution

Could be the product of a pseudogene. This is a truncated part of a POL protein in the mutated, non-functional YCLWTy5-1 transposon.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome Transposable element
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 308	308	Putative transposon Ty5-1 protein YCL074W		PRO_0000203503

Sequences

	Sequence		Length	Mass (Da)
	P25600 [UniParc]. Last modified July 19, 2005. Version 2. Checksum: 63CB03A9AB42E733	FASTA	308	34,507
	10 20 30 40 50 60 MDVDTAFLNS TMDEPIYVKQ PPGFVNERNP DYVWELYGGM YGLKQAPLLW NEHINNTLKK 70 80 90 100 110 120 IGFCRHEGEH GLYFRSTSDG PIYIAVYVDD LLVAAPSPKI YDRVKQELTK LYSMKDLGKV 130 140 150 160 170 180 DKFLGLNIHQ SSNGDITLSL QDYIAKAASE SEINTFKLTQ TPLCNSKPLF ETTSPHLKDI 190 200 210 220 230 240 TPYQSIVGQL LFCANTGRPD ISYPVSLLSR FLREPRAIHL ESARRVLRYL YTTRSMCLKY 250 260 270 280 290 300 RSGSQLALTV YCDASHGAIH DLPHSTGGYV TLLAGAPVTW SSKKLKGVIP VPSTEAEYIT ASETVMEI

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The complete DNA sequence of yeast chromosome III." Oliver S.G., van der Aart Q.J.M., Agostoni-Carbone M.L., Aigle M., Alberghina L., Alexandraki D., Antoine G., Anwar R., Ballesta J.P.G., Benit P., Berben G., Bergantino E., Biteau N., Bolle P.-A., Bolotin-Fukuhara M., Brown A., Brown A.J.P., Buhler J.-M. , Carcano C., Carignani G., Cederberg H., Chanet R., Contreras R., Crouzet M., Daignan-Fornier B., Defoor E., Delgado M.D., Demolder J., Doira C., Dubois E., Dujon B., Duesterhoeft A., Erdmann D., Esteban M., Fabre F., Fairhead C., Faye G., Feldmann H., Fiers W., Francingues-Gaillard M.-C., Franco L., Frontali L., Fukuhara H., Fuller L.J., Galland P., Gent M.E., Gigot D., Gilliquet V., Glansdorff N., Goffeau A., Grenson M., Grisanti P., Grivell L.A., de Haan M., Haasemann M., Hatat D., Hoenicka J., Hegemann J.H., Herbert C.J., Hilger F., Hohmann S., Hollenberg C.P., Huse K., Iborra F., Indge K.J., Isono K., Jacq C., Jacquet M., James C.M., Jauniaux J.-C., Jia Y., Jimenez A., Kelly A., Kleinhans U., Kreisl P., Lanfranchi G., Lewis C., van der Linden C.G., Lucchini G., Lutzenkirchen K., Maat M.J., Mallet L., Mannhaupt G., Martegani E., Mathieu A., Maurer C.T.C., McConnell D., McKee R.A., Messenguy F., Mewes H.-W., Molemans F., Montague M.A., Muzi Falconi M., Navas L., Newlon C.S., Noone D., Pallier C., Panzeri L., Pearson B.M., Perea J., Philippsen P., Pierard A., Planta R.J., Plevani P., Poetsch B., Pohl F.M., Purnelle B., Ramezani Rad M., Rasmussen S.W., Raynal A., Remacha M.A., Richterich P., Roberts A.B., Rodriguez F., Sanz E., Schaaff-Gerstenschlaeger I., Scherens B., Schweitzer B., Shu Y., Skala J., Slonimski P.P., Sor F., Soustelle C., Spiegelberg R., Stateva L.I., Steensma H.Y., Steiner S., Thierry A., Thireos G., Tzermia M., Urrestarazu L.A., Valle G., Vetter I., van Vliet-Reedijk J.C., Voet M., Volckaert G., Vreken P., Wang H., Warmington J.R., von Wettstein D., Wicksteed B.L., Wilson C., Wurst H., Xu G., Yoshikawa A., Zimmermann F.K., Sgouros J.G. Nature 357:38-46(1992) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 204508 / S288c.
[2]	Valles G., Volckaerts G. Submitted (JUN-2001) to the EMBL/GenBank/DDBJ databases Cited for: SEQUENCE REVISION TO 85; 132 AND 246.
[3]	"Yeast retrotransposon revealed." Voytas D.F., Boeke J.D. Nature 358:717-717(1992) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION AS PART OF TRANSPOSON TY5-1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	X59720 Genomic DNA. No translation available.
PIR	S19406.
3D structure databases
ProteinModelPortal	P25600.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-7287N.
MINT	MINT-552220.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
SGD	S000000579. YCL074W.
Phylogenomic databases
OrthoDB	EOG4HTD19.
Gene expression databases
Genevestigator	P25600.
Family and domain databases
InterPro	IPR013103. RVT_2. [Graphical view]
Pfam	PF07727. RVT_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

YCH4_YEAST

Accession

Primary (citable) accession number: P25600

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 1, 1992
Last sequence update:	July 19, 2005
Last modified:	April 3, 2013
This is version 63 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Fungal Protein Annotation Program