Reviewed, UniProtKB/Swiss-Prot P25576 (YCE7_YEAST)

Names and origin

Protein names

Recommended name:
    UPF0647 protein YCL047C

Gene names

Ordered Locus Names:	YCL047C
ORF Names:	YCL47C

Organism

Saccharomyces cerevisiae (Baker's yeast) [Complete proteome]

Taxonomic identifier

4932 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces

Protein attributes

Sequence length	258 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Miscellaneous	Present with 830 molecules/cell in log phase SD medium. Ref.2
Sequence similarities	Belongs to the UPF0647 family.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	nucleotidyltransferase activity Inferred from electronic annotation. Source: InterPro protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
PRP40	P33203	1	EBI-21752,EBI-701
SSM4	P40318	1	EBI-21752,EBI-18208

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 258	258	UPF0647 protein YCL047C		PRO_0000202549

Sequences

	Sequence		Length	Mass (Da)
	P25576-1 [UniParc]. Last modified May 1, 1992. Version 1. Checksum: 1A55281FC19854C7	FASTA	258	29,673
	10 20 30 40 50 60 MKKTFEQFRK SNLLFQVLKG PQHLECQKLF VLDSSFNPPH LAHFQLLSQT IKNFKLKDTR 70 80 90 100 110 120 SHVLLLLAVN NADKLPKPAS FPTRLEMMCL FADYLQEKLP QSVVSVGLTV FSKFIDKDKI 130 140 150 160 170 180 LHEQFVKGCS ADIGYLVGFD TIARIFDEKY YHPLKISDVM ESFMSGSQLY CLARGDCHLS 190 200 210 220 230 240 AESQLRYASD ILEGKFEPVI PREWGARIHV MQNDYPALRN VSSSEIRNKL KNGQVESLKD 250 ELPLCIYDYL INNKTIFD

References

[1]

"The complete DNA sequence of yeast chromosome III." Oliver S.G., van der Aart Q.J.M., Agostoni-Carbone M.L., Aigle M., Alberghina L., Alexandraki D., Antoine G., Anwar R., Ballesta J.P.G., Benit P., Berben G., Bergantino E., Biteau N., Bolle P.-A., Bolotin-Fukuhara M., Brown A., Brown A.J.P., Buhler J.-M. , Carcano C., Carignani G., Cederberg H., Chanet R., Contreras R., Crouzet M., Daignan-Fornier B., Defoor E., Delgado M.D., Demolder J., Doira C., Dubois E., Dujon B., Duesterhoeft A., Erdmann D., Esteban M., Fabre F., Fairhead C., Faye G., Feldmann H., Fiers W., Francingues-Gaillard M.-C., Franco L., Frontali L., Fukuhara H., Fuller L.J., Galland P., Gent M.E., Gigot D., Gilliquet V., Glansdorff N., Goffeau A., Grenson M., Grisanti P., Grivell L.A., de Haan M., Haasemann M., Hatat D., Hoenicka J., Hegemann J.H., Herbert C.J., Hilger F., Hohmann S., Hollenberg C.P., Huse K., Iborra F., Indge K.J., Isono K., Jacq C., Jacquet M., James C.M., Jauniaux J.-C., Jia Y., Jimenez A., Kelly A., Kleinhans U., Kreisl P., Lanfranchi G., Lewis C., van der Linden C.G., Lucchini G., Lutzenkirchen K., Maat M.J., Mallet L., Mannhaupt G., Martegani E., Mathieu A., Maurer C.T.C., McConnell D., McKee R.A., Messenguy F., Mewes H.-W., Molemans F., Montague M.A., Muzi Falconi M., Navas L., Newlon C.S., Noone D., Pallier C., Panzeri L., Pearson B.M., Perea J., Philippsen P., Pierard A., Planta R.J., Plevani P., Poetsch B., Pohl F.M., Purnelle B., Ramezani Rad M., Rasmussen S.W., Raynal A., Remacha M.A., Richterich P., Roberts A.B., Rodriguez F., Sanz E., Schaaff-Gerstenschlaeger I., Scherens B., Schweitzer B., Shu Y., Skala J., Slonimski P.P., Sor F., Soustelle C., Spiegelberg R., Stateva L.I., Steensma H.Y., Steiner S., Thierry A., Thireos G., Tzermia M., Urrestarazu L.A., Valle G., Vetter I., van Vliet-Reedijk J.C., Voet M., Volckaert G., Vreken P., Wang H., Warmington J.R., von Wettstein D., Wicksteed B.L., Wilson C., Wurst H., Xu G., Yoshikawa A., Zimmermann F.K., Sgouros J.G. Nature 357:38-46(1992) [PubMed: 1574125] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 204508 / S288c.

[2]

"Global analysis of protein expression in yeast." Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S. Nature 425:737-741(2003) [PubMed: 14562106] [Abstract] Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].

Cross-references

Sequence databases
EMBLGenBankDDBJ	X59720 Genomic DNA. Translation: CAA42369.1.
PIR	S19376.
RefSeq	NP_009883.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
IntAct	P25576. 3 interactions.
Proteomic databases
PeptideAtlas	P25576.
Genome annotation databases
Ensembl	YCL047C. Saccharomyces cerevisiae. [Contig view]
GeneID	850310.
GenomeReviews	Gene locus YCL047C in contig X59720_GR.
KEGG	sce:YCL047C.
NMPDR	fig|4932.3.peg.603.
Organism-specific databases
CYGD	YCL047c.
SGD	S000000552. YCL047C.
Yeast-GFP	Search...
Phylogenomic databases
HOGENOM	P25576.
OMA	P25576. GLTNHAK.
Gene expression databases
ArrayExpress	P25576.
GermOnline	YCL047C. Saccharomyces cerevisiae.
Family and domain databases
InterPro	IPR004820. Cytidylyltransf. IPR019450. NMN_adenylylTrfase_C. [Graphical view]
Pfam	PF01467. CTP_transf_2. 1 hit. PF10362. DUF2432. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	965706.

Entry information

Entry name

YCE7_YEAST

Accession

Primary (citable) accession number: P25576

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 1, 1992
Last sequence update:	May 1, 1992
Last modified:	June 16, 2009
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

FPAP (Fungal Proteome Annotation Project)