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Protein

40S ribosomal protein S11

Gene

RPS11

Organism
Zea mays (Maize)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S11
Gene namesi
Name:RPS11
OrganismiZea mays (Maize)
Taxonomic identifieri4577 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeTripsacinaeZea
Proteomesi
  • UP000007305 Componenti: Unplaced

Organism-specific databases

MaizeGDBi69569.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001285201 – 15940S ribosomal protein S11Add BLAST159

Proteomic databases

PaxDbiP25460.
PRIDEiP25460.

Expressioni

Gene expression databases

ExpressionAtlasiP25460. baseline and differential.
GenevisibleiP25460. ZM.

Interactioni

Protein-protein interaction databases

STRINGi4577.GRMZM2G044800_P01.

Structurei

3D structure databases

ProteinModelPortaliP25460.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S17P family.Curated

Phylogenomic databases

eggNOGiKOG1728. Eukaryota.
COG0186. LUCA.
HOGENOMiHOG000231341.
KOiK02949.
OMAiVIIRREY.
OrthoDBiEOG09360QR2.

Family and domain databases

InterProiIPR012340. NA-bd_OB-fold.
IPR032440. Ribosomal_S11_N.
IPR000266. Ribosomal_S17/S11.
IPR028333. Ribosomal_S17_arc-typ.
IPR019979. Ribosomal_S17_CS.
[Graphical view]
PANTHERiPTHR10744. PTHR10744. 1 hit.
PfamiPF00366. Ribosomal_S17. 1 hit.
PF16205. Ribosomal_S17_N. 1 hit.
[Graphical view]
PRINTSiPR00973. RIBOSOMALS17.
ProDomiPD001295. Ribosomal_S17. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR03630. uS17_arch. 1 hit.
PROSITEiPS00056. RIBOSOMAL_S17. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P25460-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEQTEKAFL KQPKVFLSSK KSGKGKKPGK GGNRFWKSIG LGFKTPREAI
60 70 80 90 100
EGTYIDKKCP FTGTVSIRGR IIAGTCHSAK MNRTIIVRRN YLHFVKKYQR
110 120 130 140 150
YEKRHSNIPA HISPCFRVKE GDHVIIGQCR PLSKTVRFNV VKVIPAGSAA

AGKKAFTAA
Length:159
Mass (Da):17,690
Last modified:May 1, 1992 - v1
Checksum:i650279BBFEB32855
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X55967 mRNA. Translation: CAA39438.1.
PIRiS16577.
RefSeqiNP_001105562.1. NM_001112092.1.
NP_001311162.1. NM_001324233.1.
XP_008668895.1. XM_008670673.1.
UniGeneiZm.2157.

Genome annotation databases

EnsemblPlantsiZm00001d002339_T001; Zm00001d002339_T001; Zm00001d002339.
Zm00001d026286_T001; Zm00001d026286_T001; Zm00001d026286.
GeneIDi103645951.
542552.
GrameneiZm00001d002339_T001; Zm00001d002339_T001; Zm00001d002339.
Zm00001d026286_T001; Zm00001d026286_T001; Zm00001d026286.
KEGGizma:103645951.
zma:542552.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X55967 mRNA. Translation: CAA39438.1.
PIRiS16577.
RefSeqiNP_001105562.1. NM_001112092.1.
NP_001311162.1. NM_001324233.1.
XP_008668895.1. XM_008670673.1.
UniGeneiZm.2157.

3D structure databases

ProteinModelPortaliP25460.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4577.GRMZM2G044800_P01.

Proteomic databases

PaxDbiP25460.
PRIDEiP25460.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiZm00001d002339_T001; Zm00001d002339_T001; Zm00001d002339.
Zm00001d026286_T001; Zm00001d026286_T001; Zm00001d026286.
GeneIDi103645951.
542552.
GrameneiZm00001d002339_T001; Zm00001d002339_T001; Zm00001d002339.
Zm00001d026286_T001; Zm00001d026286_T001; Zm00001d026286.
KEGGizma:103645951.
zma:542552.

Organism-specific databases

MaizeGDBi69569.

Phylogenomic databases

eggNOGiKOG1728. Eukaryota.
COG0186. LUCA.
HOGENOMiHOG000231341.
KOiK02949.
OMAiVIIRREY.
OrthoDBiEOG09360QR2.

Gene expression databases

ExpressionAtlasiP25460. baseline and differential.
GenevisibleiP25460. ZM.

Family and domain databases

InterProiIPR012340. NA-bd_OB-fold.
IPR032440. Ribosomal_S11_N.
IPR000266. Ribosomal_S17/S11.
IPR028333. Ribosomal_S17_arc-typ.
IPR019979. Ribosomal_S17_CS.
[Graphical view]
PANTHERiPTHR10744. PTHR10744. 1 hit.
PfamiPF00366. Ribosomal_S17. 1 hit.
PF16205. Ribosomal_S17_N. 1 hit.
[Graphical view]
PRINTSiPR00973. RIBOSOMALS17.
ProDomiPD001295. Ribosomal_S17. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR03630. uS17_arch. 1 hit.
PROSITEiPS00056. RIBOSOMAL_S17. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS11_MAIZE
AccessioniPrimary (citable) accession number: P25460
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 1992
Last sequence update: May 1, 1992
Last modified: November 30, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.