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Protein

Protein SIS1

Gene

SIS1

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Required for nuclear migration during mitosis. It is required for the normal initiation of translation. Might mediate the dissociation of a specific protein complex of the translation machinery. Essential for viability.

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • misfolded protein binding Source: SGD

GO - Biological processi

  • cell cycle Source: UniProtKB-KW
  • misfolded protein transport Source: SGD
  • nucleus-associated proteasomal ubiquitin-dependent protein catabolic process Source: SGD
  • protein folding Source: SGD
  • translational initiation Source: SGD
  • tRNA import into nucleus Source: SGD
Complete GO annotation...

Keywords - Molecular functioni

Chaperone

Keywords - Biological processi

Cell cycle

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciYEAST:G3O-33049-MONOMER.
ReactomeiR-SCE-3371453. Regulation of HSF1-mediated heat shock response.
R-SCE-3371568. Attenuation phase.
R-SCE-3371571. HSF1-dependent transactivation.
R-SCE-5687128. MAPK6/MAPK4 signaling.
R-SCE-6798695. Neutrophil degranulation.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein SIS1
Gene namesi
Name:SIS1
Ordered Locus Names:YNL007C
ORF Names:N2879
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome XIV

Organism-specific databases

EuPathDBiFungiDB:YNL007C.
SGDiS000004952. SIS1.

Subcellular locationi

GO - Cellular componenti

  • cytosolic small ribosomal subunit Source: SGD
  • nucleus Source: SGD
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000710901 – 352Protein SIS1Add BLAST352

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei275PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiP25294.
PRIDEiP25294.

PTM databases

iPTMnetiP25294.

Interactioni

Subunit structurei

Interacts with polyadenylate-binding protein PAB1.1 Publication

Binary interactionsi

WithEntry#Exp.IntActNotes
SSA1P105913EBI-17244,EBI-8591
SUP35Q7LKB13EBI-17244,EBI-8411471From a different organism.

GO - Molecular functioni

  • misfolded protein binding Source: SGD

Protein-protein interaction databases

BioGridi35818. 78 interactors.
DIPiDIP-4385N.
IntActiP25294. 20 interactors.
MINTiMINT-472083.

Structurei

Secondary structure

1352
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi6 – 11Combined sources6
Helixi19 – 33Combined sources15
Helixi42 – 55Combined sources14
Helixi58 – 67Combined sources10
Helixi69 – 73Combined sources5
Beta strandi181 – 188Combined sources8
Helixi190 – 195Combined sources6
Beta strandi198 – 207Combined sources10
Turni208 – 210Combined sources3
Beta strandi211 – 220Combined sources10
Beta strandi230 – 235Combined sources6
Beta strandi237 – 239Combined sources3
Beta strandi241 – 244Combined sources4
Beta strandi248 – 255Combined sources8
Beta strandi259 – 264Combined sources6
Beta strandi267 – 272Combined sources6
Helixi276 – 281Combined sources6
Beta strandi283 – 288Combined sources6
Beta strandi290 – 292Combined sources3
Beta strandi294 – 301Combined sources8
Beta strandi308 – 310Combined sources3
Beta strandi319 – 321Combined sources3
Beta strandi328 – 332Combined sources5
Helixi344 – 347Combined sources4

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1C3GX-ray2.70A180-349[»]
2B26X-ray3.20A/B/C181-352[»]
4RWUX-ray1.25A1-89[»]
ProteinModelPortaliP25294.
SMRiP25294.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP25294.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 70JPROSITE-ProRule annotationAdd BLAST67

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi75 – 166Gly-richAdd BLAST92

Sequence similaritiesi

Contains 1 J domain.PROSITE-ProRule annotation

Phylogenomic databases

GeneTreeiENSGT00760000118947.
HOGENOMiHOG000226718.
InParanoidiP25294.
KOiK09510.
OMAiRAIDENF.
OrthoDBiEOG092C1UGR.

Family and domain databases

CDDicd06257. DnaJ. 1 hit.
Gene3Di1.10.287.110. 1 hit.
InterProiIPR002939. DnaJ_C.
IPR001623. DnaJ_domain.
IPR018253. DnaJ_domain_CS.
IPR008971. HSP40/DnaJ_pept-bd.
[Graphical view]
PfamiPF00226. DnaJ. 1 hit.
PF01556. DnaJ_C. 1 hit.
[Graphical view]
PRINTSiPR00625. JDOMAIN.
SMARTiSM00271. DnaJ. 1 hit.
[Graphical view]
SUPFAMiSSF46565. SSF46565. 1 hit.
SSF49493. SSF49493. 2 hits.
PROSITEiPS00636. DNAJ_1. 1 hit.
PS50076. DNAJ_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P25294-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKETKLYDL LGVSPSANEQ ELKKGYRKAA LKYHPDKPTG DTEKFKEISE
60 70 80 90 100
AFEILNDPQK REIYDQYGLE AARSGGPSFG PGGPGGAGGA GGFPGGAGGF
110 120 130 140 150
SGGHAFSNED AFNIFSQFFG GSSPFGGADD SGFSFSSYPS GGGAGMGGMP
160 170 180 190 200
GGMGGMHGGM GGMPGGFRSA SSSPTYPEEE TVQVNLPVSL EDLFVGKKKS
210 220 230 240 250
FKIGRKGPHG ASEKTQIDIQ LKPGWKAGTK ITYKNQGDYN PQTGRRKTLQ
260 270 280 290 300
FVIQEKSHPN FKRDGDDLIY TLPLSFKESL LGFSKTIQTI DGRTLPLSRV
310 320 330 340 350
QPVQPSQTST YPGQGMPTPK NPSQRGNLIV KYKVDYPISL NDAQKRAIDE

NF
Length:352
Mass (Da):37,590
Last modified:May 1, 1992 - v1
Checksum:i642D3709C0FD5682
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X58460 Genomic DNA. Translation: CAA41366.1.
Z71283 Genomic DNA. Translation: CAA95866.1.
BK006947 Genomic DNA. Translation: DAA10536.1.
PIRiA39660.
RefSeqiNP_014391.1. NM_001182846.1.

Genome annotation databases

EnsemblFungiiYNL007C; YNL007C; YNL007C.
GeneIDi855725.
KEGGisce:YNL007C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X58460 Genomic DNA. Translation: CAA41366.1.
Z71283 Genomic DNA. Translation: CAA95866.1.
BK006947 Genomic DNA. Translation: DAA10536.1.
PIRiA39660.
RefSeqiNP_014391.1. NM_001182846.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1C3GX-ray2.70A180-349[»]
2B26X-ray3.20A/B/C181-352[»]
4RWUX-ray1.25A1-89[»]
ProteinModelPortaliP25294.
SMRiP25294.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi35818. 78 interactors.
DIPiDIP-4385N.
IntActiP25294. 20 interactors.
MINTiMINT-472083.

PTM databases

iPTMnetiP25294.

Proteomic databases

MaxQBiP25294.
PRIDEiP25294.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYNL007C; YNL007C; YNL007C.
GeneIDi855725.
KEGGisce:YNL007C.

Organism-specific databases

EuPathDBiFungiDB:YNL007C.
SGDiS000004952. SIS1.

Phylogenomic databases

GeneTreeiENSGT00760000118947.
HOGENOMiHOG000226718.
InParanoidiP25294.
KOiK09510.
OMAiRAIDENF.
OrthoDBiEOG092C1UGR.

Enzyme and pathway databases

BioCyciYEAST:G3O-33049-MONOMER.
ReactomeiR-SCE-3371453. Regulation of HSF1-mediated heat shock response.
R-SCE-3371568. Attenuation phase.
R-SCE-3371571. HSF1-dependent transactivation.
R-SCE-5687128. MAPK6/MAPK4 signaling.
R-SCE-6798695. Neutrophil degranulation.

Miscellaneous databases

EvolutionaryTraceiP25294.
PROiP25294.

Family and domain databases

CDDicd06257. DnaJ. 1 hit.
Gene3Di1.10.287.110. 1 hit.
InterProiIPR002939. DnaJ_C.
IPR001623. DnaJ_domain.
IPR018253. DnaJ_domain_CS.
IPR008971. HSP40/DnaJ_pept-bd.
[Graphical view]
PfamiPF00226. DnaJ. 1 hit.
PF01556. DnaJ_C. 1 hit.
[Graphical view]
PRINTSiPR00625. JDOMAIN.
SMARTiSM00271. DnaJ. 1 hit.
[Graphical view]
SUPFAMiSSF46565. SSF46565. 1 hit.
SSF49493. SSF49493. 2 hits.
PROSITEiPS00636. DNAJ_1. 1 hit.
PS50076. DNAJ_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiSIS1_YEAST
AccessioniPrimary (citable) accession number: P25294
Secondary accession number(s): D6W1H0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 1992
Last sequence update: May 1, 1992
Last modified: November 30, 2016
This is version 166 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 20300 molecules/cell in log phase SD medium.1 Publication

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
  3. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  4. Yeast chromosome XIV
    Yeast (Saccharomyces cerevisiae) chromosome XIV: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.