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P25261

- T2G1_HERAU

UniProt

P25261 - T2G1_HERAU

Protein

Type-2 restriction enzyme HgiGI

Gene

hgiGIR

Organism
Herpetosiphon aurantiacus (Herpetosiphon giganteus)
Status
Reviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 56 (03 Sep 2014)
      Sequence version 1 (01 May 1992)
      Previous versions | rss
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    Functioni

    Recognizes the double-stranded sequence GRCGYC and cleaves after R-2.

    Catalytic activityi

    Endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates.

    GO - Molecular functioni

    1. DNA binding Source: InterPro
    2. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA restriction-modification system Source: UniProtKB-KW

    Keywords - Molecular functioni

    Endonuclease, Hydrolase, Nuclease

    Keywords - Biological processi

    Restriction system

    Protein family/group databases

    REBASEi1107. HgiGI.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Type-2 restriction enzyme HgiGI (EC:3.1.21.4)
    Short name:
    R.HgiGI
    Alternative name(s):
    Endonuclease HgiGI
    Type II restriction enzyme HgiGI
    Gene namesi
    Name:hgiGIR
    OrganismiHerpetosiphon aurantiacus (Herpetosiphon giganteus)
    Taxonomic identifieri65 [NCBI]
    Taxonomic lineageiBacteriaChloroflexiChloroflexiaHerpetosiphonalesHerpetosiphonaceaeHerpetosiphon

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini‹1 – 335›335Type-2 restriction enzyme HgiGIPRO_0000077315Add
    BLAST

    Family & Domainsi

    Family and domain databases

    InterProiIPR019044. Restrct_endonuc_II_HindVP.
    [Graphical view]
    PfamiPF09519. RE_HindVP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    P25261-1 [UniParc]FASTAAdd to Basket

    « Hide

    AWGKNQFNNA FPIALACFMF SQQIKPIYIR LEKRNTEHNY IAVDQIFQIN    50
    PLDPQAFFAF EHSYHPYTEL IIGKTPAIDV VISNLQNSQI INAFEIKLTA 100
    IPDNTTAILS DHLQGCEIVI RPDTIVYLAL SIAKIFQQNS SVLLDILDPI 150
    CARISDWEDV TSIKPMIPVF CELLYTIFDR YQSAQIPILL QPIWKTQGKL 200
    SILHENCLDL FVWSNFALAK VFLDASIKPS EKSITRPERT TVWLIKMLYD 250
    FAQNGKIDYK RTLDRITFNL KNDKAFAASG MVTRKYMNSP ELHNPRIKRH 300
    LIKHIIINGG QRYLSPERRL DSAIVSTPSL FEDGL 335
    Length:335
    Mass (Da):38,460
    Last modified:May 1, 1992 - v1
    Checksum:i180CEFF503A5C90A
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X55143 Genomic DNA. Translation: CAA38946.1.
    PIRiS21954.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X55143 Genomic DNA. Translation: CAA38946.1 .
    PIRi S21954.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    REBASEi 1107. HgiGI.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    InterProi IPR019044. Restrct_endonuc_II_HindVP.
    [Graphical view ]
    Pfami PF09519. RE_HindVP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Duesterhoeft A., Kroeger M.
      Submitted (NOV-1990) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: HPA1.
    2. "Organization and gene expression within restriction-modification systems of Herpetosiphon giganteus."
      Kroeger M., Blum E., Deppe E., Duesterhoeft A., Erdmann D., Kilz S., Meyer-Rogge S., Moestl D.
      Gene 157:43-47(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: DISCUSSION OF SEQUENCE.

    Entry informationi

    Entry nameiT2G1_HERAU
    AccessioniPrimary (citable) accession number: P25261
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 1, 1992
    Last sequence update: May 1, 1992
    Last modified: September 3, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Documents

    1. Restriction enzymes and methylases
      Classification of restriction enzymes and methylases and list of entries

    External Data

    Dasty 3