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P25259

- T2C2_HERAU

UniProt

P25259 - T2C2_HERAU

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Protein

Type-2 restriction enzyme HgiCII

Gene
hgiCIIR
Organism
Herpetosiphon aurantiacus (Herpetosiphon giganteus)
Status
Reviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

Recognizes the double-stranded sequence GGWCC and cleaves after G-1.

Catalytic activityi

Endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates.

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA restriction-modification system Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Endonuclease, Hydrolase, Nuclease

Keywords - Biological processi

Restriction system

Protein family/group databases

REBASEi1100. HgiCII.

Names & Taxonomyi

Protein namesi
Recommended name:
Type-2 restriction enzyme HgiCII (EC:3.1.21.4)
Short name:
R.HgiCII
Alternative name(s):
Endonuclease HgiCII
Type II restriction enzyme HgiCII
Gene namesi
Name:hgiCIIR
OrganismiHerpetosiphon aurantiacus (Herpetosiphon giganteus)
Taxonomic identifieri65 [NCBI]
Taxonomic lineageiBacteriaChloroflexiChloroflexiaHerpetosiphonalesHerpetosiphonaceaeHerpetosiphon

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 273273Type-2 restriction enzyme HgiCIIPRO_0000077312Add
BLAST

Family & Domainsi

Family and domain databases

InterProiIPR019045. Restrct_endonuc_II_TdeIII.
[Graphical view]
PfamiPF09520. RE_TdeIII. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P25259-1 [UniParc]FASTAAdd to Basket

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MSINPITRNK IKDYLNGFID QQLAVYSQRN LREFHDVDSY LAAISSDGDL    50
KPFHASIIPS AIMRLNRFER SLSTGLGSTF EECARVIALD HHAVAIRSYD 100
IHTSLDQAVW ASIDLLISNI DRNNQRQIPS ITEMLEKLQS IALTGIAENH 150
VVRADLYVQR HDGSELFFEI KSPKPNKGQC LEVMQRLLRI YAIKQNSTLP 200
THAFYAMAYN PWGANRASYT YSIVKKYTDF TNAVVIGQEF WSLIGESSTY 250
TELLEIYREV GLSKSSEITK KLL 273
Length:273
Mass (Da):31,056
Last modified:May 1, 1992 - v1
Checksum:i0403DF0B9F564619
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X55139 Genomic DNA. Translation: CAA38936.1.
PIRiJC1166.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X55139 Genomic DNA. Translation: CAA38936.1 .
PIRi JC1166.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein family/group databases

REBASEi 1100. HgiCII.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR019045. Restrct_endonuc_II_TdeIII.
[Graphical view ]
Pfami PF09520. RE_TdeIII. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Stepwise cloning and genetic organization of the seemingly unclonable HgiCII restriction-modification system from Herpetosiphon giganteus strain Hpg9, using PCR technique."
    Erdmann D., Horst G., Duesterhoeft A., Kroeger M.
    Gene 117:15-22(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: HPG9.
  2. "Organization and gene expression within restriction-modification systems of Herpetosiphon giganteus."
    Kroeger M., Blum E., Deppe E., Duesterhoeft A., Erdmann D., Kilz S., Meyer-Rogge S., Moestl D.
    Gene 157:43-47(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: DISCUSSION OF SEQUENCE.

Entry informationi

Entry nameiT2C2_HERAU
AccessioniPrimary (citable) accession number: P25259
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 1992
Last sequence update: May 1, 1992
Last modified: September 3, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. Restriction enzymes and methylases
    Classification of restriction enzymes and methylases and list of entries

External Data

Dasty 3

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