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P24599

- T2D1_HERAU

UniProt

P24599 - T2D1_HERAU

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Protein

Type-2 restriction enzyme HgiDI

Gene

hgiDIR

Organism
Herpetosiphon aurantiacus (Herpetosiphon giganteus)
Status
Reviewed - Annotation score: 2 out of 5- Protein predictedi

Functioni

Recognizes the double-stranded sequence GRCGYC and cleaves after R-2.

Catalytic activityi

Endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates.

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA restriction-modification system Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Endonuclease, Hydrolase, Nuclease

Keywords - Biological processi

Restriction system

Protein family/group databases

REBASEi1102. HgiDI.

Names & Taxonomyi

Protein namesi
Recommended name:
Type-2 restriction enzyme HgiDI (EC:3.1.21.4)
Short name:
R.HgiDI
Alternative name(s):
Endonuclease HgiDI
Type II restriction enzyme HgiDI
Gene namesi
Name:hgiDIR
OrganismiHerpetosiphon aurantiacus (Herpetosiphon giganteus)
Taxonomic identifieri65 [NCBI]
Taxonomic lineageiBacteriaChloroflexiChloroflexiaHerpetosiphonalesHerpetosiphonaceaeHerpetosiphon

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 359359Type-2 restriction enzyme HgiDIPRO_0000077313Add
BLAST

Family & Domainsi

Family and domain databases

InterProiIPR019044. Restrct_endonuc_II_HindVP.
[Graphical view]
PfamiPF09519. RE_HindVP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P24599-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFEQLNQPGL FGITNSNRDF TKKEAWGKNQ FNNAFPIALA CFMFSQNIKP
60 70 80 90 100
IYIRLEKRNI EHNYFAVDQV FQINPLEAQA FFAFEHSYHP YTELIIGKTP
110 120 130 140 150
AIDVVISNLQ NSQIINAFEI KLTAIPDNTT ANLPDNLQGC EIVIRPDTIV
160 170 180 190 200
YLALSIAKVF QQNPLALLDI LDPVCARIGD WEDATSIQPM IPLFCELLYT
210 220 230 240 250
IFDRYQAVQI PILLQPIWKT QGKLSILHEN CLDLFVWSNF ALAKVFLDAS
260 270 280 290 300
IKPSEKSITR PERTTVWLIK MLYDFAQNGK IDYKRTLDRI TFNLKNDKAF
310 320 330 340 350
AASGMVTRKY MNSPELQNPR IKRHSIKHII INGGQRYLSP ERRLDSAIVS

TPGLFEEIL
Length:359
Mass (Da):41,204
Last modified:March 1, 1992 - v1
Checksum:i67C9B01B88B6890C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X55140 Genomic DNA. Translation: CAA38937.1.
PIRiS14028.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X55140 Genomic DNA. Translation: CAA38937.1 .
PIRi S14028.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein family/group databases

REBASEi 1102. HgiDI.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR019044. Restrct_endonuc_II_HindVP.
[Graphical view ]
Pfami PF09519. RE_HindVP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Stepwise cloning and molecular characterization of the HgiDI restriction-modification system from Herpetosiphon giganteus Hpa2."
    Duesterhoeft A., Erdmann D., Kroeger M.
    Nucleic Acids Res. 19:1049-1056(1991) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: HPA2.
  2. "Organization and gene expression within restriction-modification systems of Herpetosiphon giganteus."
    Kroeger M., Blum E., Deppe E., Duesterhoeft A., Erdmann D., Kilz S., Meyer-Rogge S., Moestl D.
    Gene 157:43-47(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: DISCUSSION OF SEQUENCE.

Entry informationi

Entry nameiT2D1_HERAU
AccessioniPrimary (citable) accession number: P24599
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 1, 1992
Last sequence update: March 1, 1992
Last modified: September 3, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. Restriction enzymes and methylases
    Classification of restriction enzymes and methylases and list of entries

External Data

Dasty 3