P24562 (Y394_PSEAE) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
UPF0001 protein PA0394

Gene names

Ordered Locus Names:

PA0394

Organism

Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)

Taxonomic identifier

208964 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	230 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Perhaps involved in proline biosynthesis.
Cofactor	Pyridoxal phosphate By similarity.
Sequence similarities	Belongs to the UPF0001 family.

Ontologies

Keywords
Ligand	Pyridoxal phosphate
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 230	230	UPF0001 protein PA0394		PRO_0000163206
Amino acid modifications
	Modified residue	36	1	N6-(pyridoxal phosphate)lysine By similarity

Sequences

	Sequence		Length	Mass (Da)
	P24562 [UniParc]. Last modified March 1, 1992. Version 1. Checksum: 594AE89A1E706768	FASTA	230	24,505
	10 20 30 40 50 60 MSTIAENIAK VAARIREAAQ AAGRDPATVG LLAVSKTKPA AAVREAHAAG LRDFGENYLQ 70 80 90 100 110 120 EALGKQAELA DLPLNWHFIG PIQSNKTRPI AEHFQWVHSV DRLKIAQRLS EQRPAGLPPL 130 140 150 160 170 180 NVCLQVNVSG EASKSGCAPE DLPALAEAVK QLPNLRLRGL MAIPEPTAER AAQHAAFARL 190 200 210 220 230 RELLLDLNLG LDTLSMGMSD DLEAAIGEGA TWVRIGTALF GARDYGAPAS

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Characterisation of a Pseudomonas aeruginosa twitching motility gene and evidence for a specialised protein export system widespread in eubacteria." Whitchurch C.B., Hobbs M., Livingston S.P., Krishnapillai V., Mattick J.S. Gene 101:33-44(1991) [PubMed: 1676385] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228.
[2]	"Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen." Stover C.K., Pham X.-Q.T., Erwin A.L., Mizoguchi S.D., Warrener P., Hickey M.J., Brinkman F.S.L., Hufnagle W.O., Kowalik D.J., Lagrou M., Garber R.L., Goltry L., Tolentino E., Westbrock-Wadman S., Yuan Y., Brody L.L., Coulter S.N., Folger K.R. , Kas A., Larbig K., Lim R.M., Smith K.A., Spencer D.H., Wong G.K.-S., Wu Z., Paulsen I.T., Reizer J., Saier M.H. Jr., Hancock R.E.W., Lory S., Olson M.V. Nature 406:959-964(2000) [PubMed: 10984043] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228.
[3]	"Comparison of proC and other housekeeping genes of Pseudomonas aeruginosa with their counterparts in Escherichia coli." Savioz A., Jeenes D.J., Kocher H.P., Haas D. Gene 86:107-111(1990) [PubMed: 2107123] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 202-230. Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	M55524 Genomic DNA. Translation: AAA25959.1. AE004091 Genomic DNA. Translation: AAG03783.1. M33557 Genomic DNA. No translation available.
PIR	JN0060.
RefSeq	NP_249085.1. NC_002516.2.
3D structure databases
ProteinModelPortal	P24562.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	878395.
GenomeReviews	Gene locus PA0394 in contig AE004091_GR.
KEGG	pae:PA0394.
PATRIC	19835028. VBIPseAer58763_0415.
Organism-specific databases
PseudoCAP	PA0394.
Phylogenomic databases
HOGENOM	HBG289671.
OMA	HGSTMVR.
ProtClustDB	CLSK865829.
Enzyme and pathway databases
BioCyc	PAER208964:PA0394-MONOMER.
Family and domain databases
InterPro	IPR001608. Ala_racemase_N. IPR011078. UPF0001. [Graphical view]
KO	K06997.
PANTHER	PTHR10146. PP_YBL036C. 1 hit.
Pfam	PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PIRSF	PIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMs	TIGR00044. TIGR00044. 1 hit.
PROSITE	PS01211. UPF0001. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y394_PSEAE

Accession

Primary (citable) accession number: P24562
Secondary accession number(s): P25255

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 1, 1992
Last sequence update:	March 1, 1992
Last modified:	January 25, 2012
This is version 69 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program