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P24337 (HPSE_SOYBN) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Hydrophobic seed protein

Short name=HPS
Alternative name(s):
Allergen=Gly m 1
OrganismGlycine max (Soybean) (Glycine hispida) [Reference proteome]
Taxonomic identifier3847 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja

Protein attributes

Sequence length80 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Tissue specificity

Highly abundant in seeds.

Allergenic properties

Causes an allergic reaction in human.

Sequence similarities

Belongs to the plant LTP family. PEARLI1 subfamily.

Ontologies

Keywords
   DiseaseAllergen
   PTMDisulfide bond
   Technical term3D-structure
Complete proteome
Direct protein sequencing
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 8080Hydrophobic seed protein
PRO_0000153889

Amino acid modifications

Disulfide bond8 ↔ 43 Ref.1
Disulfide bond14 ↔ 28 Ref.1
Disulfide bond29 ↔ 67 Ref.1
Disulfide bond45 ↔ 77 Ref.1

Secondary structure

......... 80
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P24337 [UniParc].

Last modified March 1, 1992. Version 1.
Checksum: 6BF40B553E24D636

FASTA808,359
        10         20         30         40         50         60 
ALITRPSCPD LSICLNILGG SLGTVDDCCA LIGGLGDIEA IVCLCIQLRA LGILNLNRNL 

        70         80 
QLILNSCGRS YPSNATCPRT 

« Hide

References

[1]"Soybean hydrophobic protein. Isolation, partial characterization and the complete primary structure."
Odani S., Koide T., Ono T., Seto Y., Tanaka T.
Eur. J. Biochem. 162:485-491(1987) [PubMed] [Europe PMC] [Abstract]
Cited for: PROTEIN SEQUENCE, DISULFIDE BONDS.
Tissue: Seed.
[2]"Crystal structure of hydrophobic protein from soybean; a member of a new cysteine-rich family."
Baud F., Pebay-Peyroula E., Cohen-Addad C., Odani S., Lehmann M.S.
J. Mol. Biol. 231:877-887(1993) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.8 ANGSTROMS).

Cross-references

Sequence databases

PIRA29385.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1HYPX-ray1.80A1-80[»]
ProteinModelPortalP24337.
SMRP24337. Positions 6-80.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

Allergome368. Gly m 1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Gene expression databases

GenevestigatorP24337.

Family and domain databases

InterProIPR016140. Bifunc_inhib/LTP/seed_store.
IPR027923. Hydrophob_seed.
[Graphical view]
PfamPF14547. Hydrophob_seed. 1 hit.
[Graphical view]
SMARTSM00499. AAI. 1 hit.
[Graphical view]
SUPFAMSSF47699. SSF47699. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceP24337.

Entry information

Entry nameHPSE_SOYBN
AccessionPrimary (citable) accession number: P24337
Entry history
Integrated into UniProtKB/Swiss-Prot: March 1, 1992
Last sequence update: March 1, 1992
Last modified: April 16, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

Allergens

Nomenclature of allergens and list of entries