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P24337

- HPSE_SOYBN

UniProt

P24337 - HPSE_SOYBN

Protein

Hydrophobic seed protein

Gene
N/A
Organism
Glycine max (Soybean) (Glycine hispida)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    Hydrophobic seed protein
    Short name:
    HPS
    Alternative name(s):
    Allergen: Gly m 1
    OrganismiGlycine max (Soybean) (Glycine hispida)
    Taxonomic identifieri3847 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
    ProteomesiUP000008827: Unplaced

    Pathology & Biotechi

    Allergenic propertiesi

    Causes an allergic reaction in human.

    Keywords - Diseasei

    Allergen

    Protein family/group databases

    Allergomei368. Gly m 1.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 8080Hydrophobic seed proteinPRO_0000153889Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Disulfide bondi8 ↔ 431 Publication
    Disulfide bondi14 ↔ 281 Publication
    Disulfide bondi29 ↔ 671 Publication
    Disulfide bondi45 ↔ 771 Publication

    Keywords - PTMi

    Disulfide bond

    Expressioni

    Tissue specificityi

    Highly abundant in seeds.

    Gene expression databases

    GenevestigatoriP24337.

    Structurei

    Secondary structure

    1
    80
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi12 – 198
    Helixi25 – 339
    Helixi37 – 5014
    Helixi56 – 6611

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1HYPX-ray1.80A1-80[»]
    ProteinModelPortaliP24337.
    SMRiP24337. Positions 6-80.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP24337.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the plant LTP family. PEARLI1 subfamily.Curated

    Family and domain databases

    InterProiIPR016140. Bifunc_inhib/LTP/seed_store.
    IPR027923. Hydrophob_seed.
    [Graphical view]
    PfamiPF14547. Hydrophob_seed. 1 hit.
    [Graphical view]
    SMARTiSM00499. AAI. 1 hit.
    [Graphical view]
    SUPFAMiSSF47699. SSF47699. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P24337-1 [UniParc]FASTAAdd to Basket

    « Hide

    ALITRPSCPD LSICLNILGG SLGTVDDCCA LIGGLGDIEA IVCLCIQLRA   50
    LGILNLNRNL QLILNSCGRS YPSNATCPRT 80
    Length:80
    Mass (Da):8,359
    Last modified:March 1, 1992 - v1
    Checksum:i6BF40B553E24D636
    GO

    Sequence databases

    PIRiA29385.

    Cross-referencesi

    Sequence databases

    PIRi A29385.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1HYP X-ray 1.80 A 1-80 [» ]
    ProteinModelPortali P24337.
    SMRi P24337. Positions 6-80.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    Allergomei 368. Gly m 1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Miscellaneous databases

    EvolutionaryTracei P24337.

    Gene expression databases

    Genevestigatori P24337.

    Family and domain databases

    InterProi IPR016140. Bifunc_inhib/LTP/seed_store.
    IPR027923. Hydrophob_seed.
    [Graphical view ]
    Pfami PF14547. Hydrophob_seed. 1 hit.
    [Graphical view ]
    SMARTi SM00499. AAI. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47699. SSF47699. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Soybean hydrophobic protein. Isolation, partial characterization and the complete primary structure."
      Odani S., Koide T., Ono T., Seto Y., Tanaka T.
      Eur. J. Biochem. 162:485-491(1987) [PubMed] [Europe PMC] [Abstract]
      Cited for: PROTEIN SEQUENCE, DISULFIDE BONDS.
      Tissue: Seed.
    2. "Crystal structure of hydrophobic protein from soybean; a member of a new cysteine-rich family."
      Baud F., Pebay-Peyroula E., Cohen-Addad C., Odani S., Lehmann M.S.
      J. Mol. Biol. 231:877-887(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.8 ANGSTROMS).

    Entry informationi

    Entry nameiHPSE_SOYBN
    AccessioniPrimary (citable) accession number: P24337
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 1, 1992
    Last sequence update: March 1, 1992
    Last modified: October 1, 2014
    This is version 76 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

    Documents

    1. Allergens
      Nomenclature of allergens and list of entries
    2. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3