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P24337

- HPSE_SOYBN

UniProt

P24337 - HPSE_SOYBN

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Protein
Hydrophobic seed protein
Gene
N/A
Organism
Glycine max (Soybean) (Glycine hispida)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Hydrophobic seed protein
Short name:
HPS
Alternative name(s):
Allergen: Gly m 1
OrganismiGlycine max (Soybean) (Glycine hispida)
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
ProteomesiUP000008827: Unplaced

Pathology & Biotechi

Allergenic propertiesi

Causes an allergic reaction in human.

Keywords - Diseasei

Allergen

Protein family/group databases

Allergomei368. Gly m 1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 8080Hydrophobic seed protein
PRO_0000153889Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi8 ↔ 431 Publication
Disulfide bondi14 ↔ 281 Publication
Disulfide bondi29 ↔ 671 Publication
Disulfide bondi45 ↔ 771 Publication

Keywords - PTMi

Disulfide bond

Expressioni

Tissue specificityi

Highly abundant in seeds.

Gene expression databases

GenevestigatoriP24337.

Structurei

Secondary structure

Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi12 – 198
Helixi25 – 339
Helixi37 – 5014
Helixi56 – 6611

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1HYPX-ray1.80A1-80[»]
ProteinModelPortaliP24337.
SMRiP24337. Positions 6-80.

Miscellaneous databases

EvolutionaryTraceiP24337.

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR016140. Bifunc_inhib/LTP/seed_store.
IPR027923. Hydrophob_seed.
[Graphical view]
PfamiPF14547. Hydrophob_seed. 1 hit.
[Graphical view]
SMARTiSM00499. AAI. 1 hit.
[Graphical view]
SUPFAMiSSF47699. SSF47699. 1 hit.

Sequencei

Sequence statusi: Complete.

P24337-1 [UniParc]FASTAAdd to Basket

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ALITRPSCPD LSICLNILGG SLGTVDDCCA LIGGLGDIEA IVCLCIQLRA   50
LGILNLNRNL QLILNSCGRS YPSNATCPRT 80
Length:80
Mass (Da):8,359
Last modified:March 1, 1992 - v1
Checksum:i6BF40B553E24D636
GO

Sequence databases

PIRiA29385.

Cross-referencesi

Sequence databases

PIRi A29385.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1HYP X-ray 1.80 A 1-80 [» ]
ProteinModelPortali P24337.
SMRi P24337. Positions 6-80.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

Allergomei 368. Gly m 1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Miscellaneous databases

EvolutionaryTracei P24337.

Gene expression databases

Genevestigatori P24337.

Family and domain databases

InterProi IPR016140. Bifunc_inhib/LTP/seed_store.
IPR027923. Hydrophob_seed.
[Graphical view ]
Pfami PF14547. Hydrophob_seed. 1 hit.
[Graphical view ]
SMARTi SM00499. AAI. 1 hit.
[Graphical view ]
SUPFAMi SSF47699. SSF47699. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Soybean hydrophobic protein. Isolation, partial characterization and the complete primary structure."
    Odani S., Koide T., Ono T., Seto Y., Tanaka T.
    Eur. J. Biochem. 162:485-491(1987) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE, DISULFIDE BONDS.
    Tissue: Seed.
  2. "Crystal structure of hydrophobic protein from soybean; a member of a new cysteine-rich family."
    Baud F., Pebay-Peyroula E., Cohen-Addad C., Odani S., Lehmann M.S.
    J. Mol. Biol. 231:877-887(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.8 ANGSTROMS).

Entry informationi

Entry nameiHPSE_SOYBN
AccessioniPrimary (citable) accession number: P24337
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 1, 1992
Last sequence update: March 1, 1992
Last modified: April 16, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Allergens
    Nomenclature of allergens and list of entries
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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