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P24320

- RS14Z_THETH

UniProt

P24320 - RS14Z_THETH

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Protein

30S ribosomal protein S14 type Z

Gene
rpsZ, rps14, rpsN
Organism
Thermus thermophilus
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at protein leveli

Functioni

Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site By similarity.UniRule annotation

Cofactori

Binds 1 zinc ion per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi24 – 241Zinc By similarity
Metal bindingi27 – 271Zinc By similarity
Metal bindingi40 – 401Zinc By similarity
Metal bindingi43 – 431Zinc By similarity

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro
  3. zinc ion binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

Metal-binding, RNA-binding, rRNA-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S14 type Z
Gene namesi
Name:rpsZ
Synonyms:rps14, rpsN
OrganismiThermus thermophilus
Taxonomic identifieri274 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed By similarity
Chaini2 – 616030S ribosomal protein S14 type ZUniRule annotationPRO_0000130956Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S3 and S10 By similarity.

Protein-protein interaction databases

STRINGi262724.TTC1315.

Structurei

Secondary structure

1
61
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi5 – 117
Beta strandi17 – 193
Beta strandi25 – 273
Beta strandi31 – 344
Turni35 – 384
Helixi41 – 5010
Beta strandi53 – 553

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1TWTmodel-Q2-61[»]
4BYBX-ray3.35N1-61[»]
ProteinModelPortaliP24320.
SMRiP24320. Positions 2-61.

Family & Domainsi

Sequence similaritiesi

Family and domain databases

HAMAPiMF_01364_B. Ribosomal_S14_2_B.
InterProiIPR001209. Ribosomal_S14.
IPR018271. Ribosomal_S14_CS.
IPR023053. Ribosomal_S14_Z.
[Graphical view]
PANTHERiPTHR19836. PTHR19836. 1 hit.
PfamiPF00253. Ribosomal_S14. 1 hit.
[Graphical view]
PROSITEiPS00527. RIBOSOMAL_S14. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P24320-1 [UniParc]FASTAAdd to Basket

« Hide

MARKALIEKA KRTPKFKVRA YTRCVRCGRA RSVYRFFGLC RICLRELAHK   50
GQLPGVRKAS W 61
Length:61
Mass (Da):7,140
Last modified:January 23, 2007 - v4
Checksum:iBEE8AB1E1E86B531
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z31558 Genomic DNA. Translation: CAA83433.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z31558 Genomic DNA. Translation: CAA83433.1 .

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1TWT model - Q 2-61 [» ]
4BYB X-ray 3.35 N 1-61 [» ]
ProteinModelPortali P24320.
SMRi P24320. Positions 2-61.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 262724.TTC1315.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

HAMAPi MF_01364_B. Ribosomal_S14_2_B.
InterProi IPR001209. Ribosomal_S14.
IPR018271. Ribosomal_S14_CS.
IPR023053. Ribosomal_S14_Z.
[Graphical view ]
PANTHERi PTHR19836. PTHR19836. 1 hit.
Pfami PF00253. Ribosomal_S14. 1 hit.
[Graphical view ]
PROSITEi PS00527. RIBOSOMAL_S14. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Sequencing and analysis of the Thermus thermophilus ribosomal protein gene cluster equivalent to the spectinomycin operon."
    Vysotskaya V.S., Shcherbakov D.V., Garber M.B.
    Gene 193:23-30(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: VK1.

Entry informationi

Entry nameiRS14Z_THETH
AccessioniPrimary (citable) accession number: P24320
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 1, 1992
Last sequence update: January 23, 2007
Last modified: February 19, 2014
This is version 83 of the entry and version 4 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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