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P24281 (YAAK_BACSU) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 81. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
UPF0133 protein yaaK
Gene names
Name:yaaK
Ordered Locus Names:BSU00200
OrganismBacillus subtilis
Taxonomic identifier1423 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacillalesBacillaceaeBacillus

Protein attributes

Sequence length107 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subunit structure

Homodimer By similarity. HAMAP MF_00274

Sequence similarities

Belongs to the UPF0133 family.

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 107107UPF0133 protein yaaK HAMAP MF_00274
PRO_0000170365

Sequences

Sequence LengthMass (Da)Tools
P24281 [UniParc].

Last modified March 1, 1992. Version 1.
Checksum: DB3EBA3420F6A9E6

FASTA10711,781
        10         20         30         40         50         60 
MRGGMGNMQK MMKQMQKMQK DMAKAQEELA EKVVEGTAGG GMVTVKANGQ KEILDVIIKE 

        70         80         90        100 
EVVDPEDIDM LQDLVLAATN EALKKVDEIT NETMGQFTKG MNMPGLF 

« Hide

References

« Hide 'large scale' references
[1]"Molecular cloning, genetic characterization and DNA sequence analysis of the recM region of Bacillus subtilis."
Alonso J.C., Shirahige K., Ogasawara N.
Nucleic Acids Res. 18:6771-6777(1990) [PubMed: 2124672] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: 168 / YB886 / BG214.
[2]"Systematic sequencing of the 180 kilobase region of the Bacillus subtilis chromosome containing the replication origin."
Ogasawara N., Nakai S., Yoshikawa H.
DNA Res. 1:1-14(1994) [PubMed: 7584024] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: 168.
[3]"The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V. expand/collapse author list , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
Nature 390:249-256(1997) [PubMed: 9384377] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 168.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X17014 Genomic DNA. Translation: CAA34878.1.
D26185 Genomic DNA. Translation: BAA05256.1.
AL009126 Genomic DNA. Translation: CAB11796.1.
PIRS13787.
RefSeqNP_387901.1. NC_000964.3.

3D structure databases

ProteinModelPortalP24281.
SMRP24281. Positions 7-98.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBACT00000003048; EBBACP00000003048; EBBACG00000003042.
GeneID937027.
GenomeReviewsGene locus BSU00200 in contig AL009126_GR.
KEGGbsu:BSU00200.
NMPDRfig|224308.1.peg.20.
PATRIC18971501. VBIBacSub10457_0021.

Organism-specific databases

GenoListBSU00200.

Phylogenomic databases

GeneTreeEBGT00050000001521.
HOGENOMHBG734215.
OMAMADFLGM.
PhylomeDBP24281.
ProtClustDBPRK00153.

Enzyme and pathway databases

BioCycBSUB:BSU00200-MONOMER.

Family and domain databases

HAMAPMF_00274. UPF0133.
[Tree]
InterProIPR004401. UPF0133.
[Graphical view]
Gene3DG3DSA:3.30.1310.10. CHP103. 1 hit.
KOK09747.
PfamPF02575. DUF149. 1 hit.
[Graphical view]
PIRSFPIRSF004555. UCP004555. 1 hit.
SUPFAMSSF82607. CHP00103. 1 hit.
TIGRFAMsTIGR00103. DNA_YbaB_EbfC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameYAAK_BACSU
AccessionPrimary (citable) accession number: P24281
Entry history
Integrated into UniProtKB/Swiss-Prot: March 1, 1992
Last sequence update: March 1, 1992
Last modified: January 25, 2012
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

Bacillus subtilis

Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

SIMILARITY comments

Index of protein domains and families