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Protein

Uncharacterized protein YbgA

Gene

ybgA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11108-MONOMER.
ECOL316407:JW0697-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YbgA
Alternative name(s):
ORF169
TKP
Gene namesi
Name:ybgA
Ordered Locus Names:b0707, JW0697
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11108. ybgA.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001686991 – 169Uncharacterized protein YbgAAdd BLAST169

Proteomic databases

PaxDbiP24252.
PRIDEiP24252.

Interactioni

Protein-protein interaction databases

BioGridi4261605. 12 interactors.
IntActiP24252. 6 interactors.
STRINGi511145.b0707.

Structurei

3D structure databases

ProteinModelPortaliP24252.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4107SEY. Bacteria.
COG3272. LUCA.
HOGENOMiHOG000117990.
OMAiHPANTRD.
PhylomeDBiP24252.

Family and domain databases

InterProiIPR013560. DUF1722.
[Graphical view]
PfamiPF08349. DUF1722. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P24252-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNLQRFDDST LIRIFALHEL HRLKEHGLTR GALLDYHSRY KLVFLAHSQP
60 70 80 90 100
EYRKLGPFVA DIHQWQNLDD YYNQYRQRVV VLLSHPANPR DHTNVLMHVQ
110 120 130 140 150
GYFRPHIDST ERQQLAALID SYRRGEQPLL APLMRIKHYM ALYPDAWLSG
160
QRYFELWPRV INLRHSGVL
Length:169
Mass (Da):20,211
Last modified:March 1, 1992 - v1
Checksum:i32BA716EB3FB5C53
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
K01299 Genomic DNA. Translation: AAA24387.1.
U00096 Genomic DNA. Translation: AAC73801.1.
AP009048 Genomic DNA. Translation: BAA35366.1.
L02373 Genomic DNA. Translation: AAC63077.1.
PIRiB64806.
RefSeqiNP_415235.1. NC_000913.3.
WP_001053305.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73801; AAC73801; b0707.
BAA35366; BAA35366; BAA35366.
GeneIDi944853.
KEGGiecj:JW0697.
eco:b0707.
PATRICi32116609. VBIEscCol129921_0737.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
K01299 Genomic DNA. Translation: AAA24387.1.
U00096 Genomic DNA. Translation: AAC73801.1.
AP009048 Genomic DNA. Translation: BAA35366.1.
L02373 Genomic DNA. Translation: AAC63077.1.
PIRiB64806.
RefSeqiNP_415235.1. NC_000913.3.
WP_001053305.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP24252.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261605. 12 interactors.
IntActiP24252. 6 interactors.
STRINGi511145.b0707.

Proteomic databases

PaxDbiP24252.
PRIDEiP24252.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73801; AAC73801; b0707.
BAA35366; BAA35366; BAA35366.
GeneIDi944853.
KEGGiecj:JW0697.
eco:b0707.
PATRICi32116609. VBIEscCol129921_0737.

Organism-specific databases

EchoBASEiEB1099.
EcoGeneiEG11108. ybgA.

Phylogenomic databases

eggNOGiENOG4107SEY. Bacteria.
COG3272. LUCA.
HOGENOMiHOG000117990.
OMAiHPANTRD.
PhylomeDBiP24252.

Enzyme and pathway databases

BioCyciEcoCyc:EG11108-MONOMER.
ECOL316407:JW0697-MONOMER.

Miscellaneous databases

PROiP24252.

Family and domain databases

InterProiIPR013560. DUF1722.
[Graphical view]
PfamiPF08349. DUF1722. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYBGA_ECOLI
AccessioniPrimary (citable) accession number: P24252
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 1, 1992
Last sequence update: March 1, 1992
Last modified: November 2, 2016
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.