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Protein

UPF0176 protein YceA

Gene

yceA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei200Cysteine persulfide intermediateUniRule annotation1

Enzyme and pathway databases

BioCyciEcoCyc:EG11116-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0176 protein YceA
Alternative name(s):
ORF39.9
Gene namesi
Name:yceA
Ordered Locus Names:b1055, JW1042
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11116 yceA

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001614701 – 350UPF0176 protein YceAAdd BLAST350

Proteomic databases

PaxDbiP24188
PRIDEiP24188

Expressioni

Inductioni

Is expressed at all temperatures, but accumulation of yceA transcripts decline with raising temperature. Thus, its expression is repressed by heat shock.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
rplLP0A7K23EBI-560455,EBI-543702

Protein-protein interaction databases

BioGridi4262843, 125 interactors
DIPiDIP-11521N
IntActiP24188, 7 interactors
STRINGi316385.ECDH10B_1126

Structurei

3D structure databases

ProteinModelPortaliP24188
SMRiP24188
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini146 – 240RhodaneseUniRule annotationAdd BLAST95

Sequence similaritiesi

Belongs to the UPF0176 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C72 Bacteria
COG1054 LUCA
HOGENOMiHOG000034809
InParanoidiP24188
KOiK07146
OMAiDHKESYC
PhylomeDBiP24188

Family and domain databases

CDDicd01518 RHOD_YceA, 1 hit
Gene3Di3.40.250.10, 1 hit
HAMAPiMF_00469 UPF0176, 1 hit
InterProiView protein in InterPro
IPR001763 Rhodanese-like_dom
IPR036873 Rhodanese-like_dom_sf
IPR022111 Rhodanese_C
IPR020936 UPF0176
PfamiView protein in Pfam
PF00581 Rhodanese, 1 hit
PF12368 Rhodanese_C, 1 hit
SMARTiView protein in SMART
SM00450 RHOD, 1 hit
SUPFAMiSSF52821 SSF52821, 1 hit
PROSITEiView protein in PROSITE
PS50206 RHODANESE_3, 1 hit

Sequencei

Sequence statusi: Complete.

P24188-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPVLHNRISN DALKAKMLAE SEPRTTISFY KYFHIADPKA TRDALYQLFT
60 70 80 90 100
ALNVFGRVYL AHEGINAQIS VPASNVETFR AQLYAFDPAL EGLRLNIALD
110 120 130 140 150
DDGKSFWVLR MKVRDRIVAD GIDDPHFDAS NVGEYLQAAE VNAMLDDPDA
160 170 180 190 200
LFIDMRNHYE YEVGHFENAL EIPADTFREQ LPKAVEMMQA HKDKKIVMYC
210 220 230 240 250
TGGIRCEKAS AWMKHNGFNK VWHIEGGIIE YARKAREQGL PVRFIGKNFV
260 270 280 290 300
FDERMGERIS DEIIAHCHQC GAPCDSHTNC KNDGCHLLFI QCPVCAEKYK
310 320 330 340 350
GCCSEICCEE SALPPEEQRR RRAGRENGNK IFNKSRGRLN TTLCIPDPTE
Length:350
Mass (Da):39,781
Last modified:July 15, 1998 - v2
Checksum:i61AB5F317B0C221B
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti82 – 83QL → HV in CAA43318 (PubMed:1840644).Curated2
Sequence conflicti312A → R in CAA43318 (PubMed:1840644).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X61000 Genomic DNA Translation: CAA43318.1
U00096 Genomic DNA Translation: AAC74139.1
AP009048 Genomic DNA Translation: BAA35853.1
PIRiD64848
RefSeqiNP_415573.1, NC_000913.3
WP_001144615.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74139; AAC74139; b1055
BAA35853; BAA35853; BAA35853
GeneIDi945601
KEGGiecj:JW1042
eco:b1055
PATRICifig|1411691.4.peg.1214

Similar proteinsi

Entry informationi

Entry nameiYCEA_ECOLI
AccessioniPrimary (citable) accession number: P24188
Secondary accession number(s): P75924
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 1, 1992
Last sequence update: July 15, 1998
Last modified: March 28, 2018
This is version 139 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health