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Protein

Protein YffB

Gene

yffB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11147-MONOMER.
ECOL316407:JW2455-MONOMER.
RETL1328306-WGS:GSTH-288-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein YffB
Gene namesi
Name:yffB
Ordered Locus Names:b2471, JW2455
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11147. yffB.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 118118Protein YffBPRO_0000169229Add
BLAST

Proteomic databases

PaxDbiP24178.
PRIDEiP24178.

Interactioni

Protein-protein interaction databases

BioGridi4259194. 13 interactions.
DIPiDIP-12024N.
IntActiP24178. 19 interactions.
MINTiMINT-1255719.
STRINGi511145.b2471.

Structurei

3D structure databases

ProteinModelPortaliP24178.
SMRiP24178. Positions 2-115.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ArsC family.Curated

Phylogenomic databases

eggNOGiENOG4105KUZ. Bacteria.
COG1393. LUCA.
HOGENOMiHOG000059714.
InParanoidiP24178.
OMAiFGIKNCD.
PhylomeDBiP24178.

Family and domain databases

Gene3Di3.40.30.10. 1 hit.
InterProiIPR006660. Arsenate_reductase-like.
IPR012336. Thioredoxin-like_fold.
IPR006504. Tscrpt_reg_Spx/MgsR.
[Graphical view]
PfamiPF03960. ArsC. 1 hit.
[Graphical view]
SUPFAMiSSF52833. SSF52833. 1 hit.
TIGRFAMsiTIGR01617. arsC_related. 1 hit.
PROSITEiPS51353. ARSC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P24178-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVTLYGIKNC DTIKKARRWL EANNIDYRFH DYRVDGLDSE LLNDFINELG
60 70 80 90 100
WEALLNTRGT TWRKLDETTR NKITDAASAA ALMTEMPAII KRPLLCVPGK
110
PMLLGFSDSS YQQFFHEV
Length:118
Mass (Da):13,601
Last modified:March 1, 1992 - v1
Checksum:i38DF13A158BEA275
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X57403 Genomic DNA. Translation: CAA40664.1.
U00096 Genomic DNA. Translation: AAC75524.1.
AP009048 Genomic DNA. Translation: BAA16345.1.
PIRiB42959.
RefSeqiNP_416966.1. NC_000913.3.
WP_000258236.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75524; AAC75524; b2471.
BAA16345; BAA16345; BAA16345.
GeneIDi946953.
KEGGiecj:JW2455.
eco:b2471.
PATRICi32120325. VBIEscCol129921_2565.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X57403 Genomic DNA. Translation: CAA40664.1.
U00096 Genomic DNA. Translation: AAC75524.1.
AP009048 Genomic DNA. Translation: BAA16345.1.
PIRiB42959.
RefSeqiNP_416966.1. NC_000913.3.
WP_000258236.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP24178.
SMRiP24178. Positions 2-115.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259194. 13 interactions.
DIPiDIP-12024N.
IntActiP24178. 19 interactions.
MINTiMINT-1255719.
STRINGi511145.b2471.

Proteomic databases

PaxDbiP24178.
PRIDEiP24178.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75524; AAC75524; b2471.
BAA16345; BAA16345; BAA16345.
GeneIDi946953.
KEGGiecj:JW2455.
eco:b2471.
PATRICi32120325. VBIEscCol129921_2565.

Organism-specific databases

EchoBASEiEB1137.
EcoGeneiEG11147. yffB.

Phylogenomic databases

eggNOGiENOG4105KUZ. Bacteria.
COG1393. LUCA.
HOGENOMiHOG000059714.
InParanoidiP24178.
OMAiFGIKNCD.
PhylomeDBiP24178.

Enzyme and pathway databases

BioCyciEcoCyc:EG11147-MONOMER.
ECOL316407:JW2455-MONOMER.
RETL1328306-WGS:GSTH-288-MONOMER.

Miscellaneous databases

PROiP24178.

Family and domain databases

Gene3Di3.40.30.10. 1 hit.
InterProiIPR006660. Arsenate_reductase-like.
IPR012336. Thioredoxin-like_fold.
IPR006504. Tscrpt_reg_Spx/MgsR.
[Graphical view]
PfamiPF03960. ArsC. 1 hit.
[Graphical view]
SUPFAMiSSF52833. SSF52833. 1 hit.
TIGRFAMsiTIGR01617. arsC_related. 1 hit.
PROSITEiPS51353. ARSC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYFFB_ECOLI
AccessioniPrimary (citable) accession number: P24178
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 1, 1992
Last sequence update: March 1, 1992
Last modified: September 7, 2016
This is version 118 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.