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Reviewed, UniProtKB/Swiss-Prot P24178 (YFFB_ECOLI)

Last modified June 16, 2009. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Protein yffB
Gene names
Name: yffB
Ordered Locus Names: b2471, JW2455
OrganismEscherichia coli (strain K12) [Complete proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length118 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

General annotation (Comments)

Sequence similarities

Belongs to the arsC family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 118118Protein yffB
PRO_0000169229

Sequences

Sequence LengthMass (Da)Tools
P24178-1 [UniParc].

Last modified March 1, 1992. Version 1.
Checksum: 38DF13A158BEA275

FASTA11813,601
        10         20         30         40         50         60 
MVTLYGIKNC DTIKKARRWL EANNIDYRFH DYRVDGLDSE LLNDFINELG WEALLNTRGT 

        70         80         90        100        110 
TWRKLDETTR NKITDAASAA ALMTEMPAII KRPLLCVPGK PMLLGFSDSS YQQFFHEV 

« Hide

References

« Hide 'large scale' references
[1]"Cloning, characterization, and expression of the dapE gene of Escherichia coli."
Bouvier J., Richaud C., Higgins W., Bogler O., Stragier S.
J. Bacteriol. 174:5265-5271(1992) [PubMed: 1644752] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: K12.
[2]"Construction of a contiguous 874-kb sequence of the Escherichia coli-K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features."
Yamamoto Y., Aiba H., Baba T., Hayashi K., Inada T., Isono K., Itoh T., Kimura S., Kitagawa M., Makino K., Miki T., Mitsuhashi N., Mizobuchi K., Mori H., Nakade S., Nakamura Y., Nashimoto H., Oshima T. expand/collapse author list , Oyama S., Saito N., Sampei G., Satoh Y., Sivasundaram S., Tagami H., Takahashi H., Takeda J., Takemoto K., Uehara K., Wada C., Yamagata S., Horiuchi T.
DNA Res. 4:91-113(1997) [PubMed: 9205837] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[3]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1474(1997) [PubMed: 9278503] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[4]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed: 16738553] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[5]"Enrichment of low abundance proteins of Escherichia coli by hydroxyapatite chromatography."
Fountoulakis M., Takacs M.-F., Berndt P., Langen H., Takacs B.
Electrophoresis 20:2181-2195(1999) [PubMed: 10493123] [Abstract]
Cited for: IDENTIFICATION BY MASS SPECTROMETRY.

Cross-references

Sequence databases

X57403 Genomic DNA. Translation: CAA40664.1.
U00096 Genomic DNA. Translation: AAC75524.1.
AP009048 Genomic DNA. Translation: BAA16345.1.
PIRB42959.
RefSeqAP_003056.1.
NP_416966.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

DIPDIP:12024N.

Genome annotation databases

GeneID946953.
GenomeReviewsGene locus JW2455 in contig AP009048_GR.
Gene locus b2471 in contig U00096_GR.
KEGGecj:JW2455.
eco:b2471.

Organism-specific databases

EchoBASEEB1137.
EcoGeneEG11147. yffB.
CMRSearch...

Phylogenomic databases

HOGENOMP24178.
OMAP24178. FGIKNCD.

Enzyme and pathway databases

BioCycEcoCyc:EG11147-MON.

Family and domain databases

InterProIPR006660. Arsenate_reductase-like.
IPR006504. CHP1617_ArsC_rel.
IPR012335. Thioredoxin_fold.
[Graphical view]
Gene3DG3DSA:3.40.30.10. Thioredoxin_fold. 1 hit.
PfamPF03960. ArsC. 1 hit.
[Graphical view]
TIGRFAMsTIGR01617. arsC_related. 1 hit.
PROSITEPS51353. ARSC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameYFFB_ECOLI
AccessionPrimary (citable) accession number: P24178
Entry history
Integrated into UniProtKB/Swiss-Prot: March 1, 1992
Last sequence update: March 1, 1992
Last modified: June 16, 2009
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents