Cyclin-dependent kinase A-1 - Arabidopsis thaliana (Mouse-ear cress)

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Reviewed, UniProtKB/Swiss-Prot P24100 (CDKA1_ARATH)

Last modified June 16, 2009. Version 86. History...

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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein names

Recommended name:
    Cyclin-dependent kinase A-1
      Short name=CDKA;1
    EC=2.7.11.22
    EC=2.7.11.23
Alternative name(s):
    Cell division control protein 2 homolog A

Gene names

Name:	CDKA-1
Synonyms:	CDC2, CDC2A
Ordered Locus Names:	At3g48750
ORF Names:	T21J18.20

Organism

Arabidopsis thaliana (Mouse-ear cress) [Complete proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

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Protein attributes

Sequence length	294 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

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General annotation (Comments)

Function	Involved in the control of the cell cycle. Essential for both G1/S and G2/M (mitosis) phase transitions. Functions in cell morphogenesis as well as cell proliferation. Required for cell division (entry into mitosis) of the generative cell in male gametogenesis. Ref.20 Ref.38 Ref.42
Catalytic activity	ATP + a protein = ADP + a phosphoprotein. ATP + [DNA-directed RNA polymerase] = ADP + [DNA-directed RNA polymerase] phosphate.
Enzyme regulation	CDK kinase activated by CDKF-1. CDK kinase activity inhibited by KRP1/ICK1, KRP2/ICK2, KRP3/ICK6, KRP4/ICK7, KRP5/ICK3, KRP6/ICK4 and KRP7/ICK5. Down-regulated by phosphorylation by WEE1. Ref.31 Ref.33 Ref.39
Subunit structure	Interacts with CYCA2-3, CYCD2-1, CYCD3-1, CYCD4-1, CYCD4-2, CYCH1-1, CYCU1-1, CYCU2-1, CYCU2-2, CYCU3-1, CYCU4-1, CYCU4-2, CYCU4-3, CKS1, KRP2/ICK2, KRP3/ICK6, KRP4/ICK7, KRP6/ICK4, KRP7/ICK5, and C-terminal domain of KRP1/ICK1. Interacts with WEE1 and TIF4A-1/EIF4A-1. Interacts with PAS2; when phosphorylated at Tyr-15. Ref.31 Ref.39 Ref.12 Ref.13 Ref.14 Ref.15 Ref.16 Ref.19 Ref.21 Ref.22 Ref.23 Ref.24 Ref.26 Ref.27 Ref.28 Ref.29 Ref.30 Ref.34 Ref.35 Ref.37 Ref.40 Ref.41
Subcellular location	Cytoplasm. Nucleus. Note: Mainly cytoplasmic. Nuclear distribution increases after binding to ICK1/KRP1. Ref.34 Ref.40
Tissue specificity	Expressed in roots, stems, flowers and siliques. Ref.10
Developmental stage	Expressed throughout the cell cycle. Expressed in actively dividing cells: root and shoot apical meristems, leaf primordia and emerging lateral root meristem. Expressed in light-grown seedlings from 1 up to 7 days after germination with a peak at 2 and 3 days. Ref.10 Ref.17
Induction	By nematode infection in roots. Down-regulated by salt stress in root meristem and replication blocking agents (hydroxyurea and aphidicolin). Ref.41 Ref.11 Ref.18
Post-translational modification	Phosphorylated at Tyr-15 by WEE1. Phosphorylation at Thr-161 is important for the kinase activity and substrate binding. Binding to the anti-phosphatase PAS2 prevents dephosphorylation. Ref.42 Ref.39 Ref.41 Ref.43
Disruption phenotype	Plants display lethal male gametophyte. Ref.38
Sequence similarities	Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily. Contains 1 protein kinase domain.
Sequence caution	The sequence AAL91258.1 differs from that shown. Reason: Frameshift at position 285. The sequence CAB87903.1 differs from that shown. Reason: Erroneous gene model prediction.

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Ontologies

Keywords
Biological process	Cell cycle Cell division Mitosis
Cellular component	Cytoplasm Nucleus
Ligand	ATP-binding Nucleotide-binding
Molecular function	Kinase Serine/threonine-protein kinase Transferase
PTM	Phosphoprotein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA endoreduplication Ref.31 Inferred from mutant phenotype. Source: TAIR cytokinesis Inferred from mutant phenotype. Source: TAIR embryonic development ending in seed dormancy Ref.38 Inferred from mutant phenotype. Source: TAIR mitosis Inferred from electronic annotation. Source: UniProtKB-KW pollen development Inferred from mutant phenotype. Source: TAIR positive regulation of cell proliferation Ref.38 Inferred from mutant phenotype. Source: TAIR protein amino acid phosphorylation Inferred from electronic annotation. Source: InterPro response to cold Inferred from expression pattern. Source: TAIR
Cellular component	cortical microtubule, transverse to long axis Inferred from direct assay. Source: TAIR cytosol Ref.43 Inferred from direct assay. Source: TAIR nucleus Ref.43 Inferred from direct assay. Source: TAIR plasma membrane Inferred from direct assay. Source: TAIR preprophase band Traceable author statement. Source: TAIR
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW RNA polymerase subunit kinase activity Inferred from electronic annotation. Source: EC cyclin-dependent protein kinase activity Inferred from electronic annotation. Source: EC protein binding Ref.12 Ref.14 Ref.16 Ref.21 Ref.22 Ref.27 Ref.28 Ref.29 Ref.31 Ref.34 Inferred from physical interaction. Source: IntAct
Complete GO annotation...

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Binary interactions

With	Entry	#Exp.	IntAct	Notes
CDKB2-1	Q8LF80	2	EBI-371713,EBI-1253579
CKS1	O23249	5	EBI-371713,EBI-1253127
CKS1B	P61024	1	EBI-371713,EBI-456371	From a different organism.
CYCA2-3	Q38819	1	EBI-371713,EBI-1781564
CYCD1-1	P42751	1	EBI-371713,EBI-2025690
CYCD2-1	P42752	1	EBI-371713,EBI-1253160
CYCD3-1	P42753	2	EBI-371713,EBI-1253610
CYCD4-1	Q8LGA1	2	EBI-371713,EBI-1253202
CYCU1-1	Q9LJ45	1	EBI-371713,EBI-1773749
CYCU2-1	Q9SHD3	1	EBI-371713,EBI-1773781
CYCU4-1	O80513	1	EBI-371713,EBI-1773819
CYCU4-3	Q9FKF6	1	EBI-371713,EBI-1773829
KRP1	Q67Y93	8	EBI-371713,EBI-1636730
KRP2	Q9SCR2	4	EBI-371713,EBI-1636748
KRP3	Q9FKB5	3	EBI-371713,EBI-1773302
KRP5	Q9LRY0	2	EBI-371713,EBI-1636764
suc1	P08463	1	EBI-371713,EBI-1104317	From a different organism.
T32M21_70	Q9LZ78	1	EBI-371713,EBI-1774363
TIF4A-1	P41376	1	EBI-371713,EBI-371706
TON1a	Q9FQ25	1	EBI-371713,EBI-1266493

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Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 294

294

Cyclin-dependent kinase A-1

PRO_0000085749

Regions

Domain

4 – 287

284

Protein kinase

Nucleotide binding

10 – 18

ATP By similarity

Sites

Active site

127

Proton acceptor By similarity

Binding site

ATP By similarity

Amino acid modifications

Modified residue

Phosphothreonine By similarity

Modified residue

Phosphotyrosine

Modified residue

161

Phosphothreonine Ref.42 Ref.43

Experimental info

Mutagenesis

T → A: Increased kinase activity; when associated with F-15. Ref.15

Mutagenesis

Y → F: Abolishes phosphorylation by WEE1. Increased kinase activity; when associated with A-14. Ref.39 Ref.15

Mutagenesis

146

D → N: Decreased kinase activity and disturbed cell cycle. Reduced frequency of cell division during embryo development. Ref.20 Ref.15

Mutagenesis

156

P → L: Decreased kinase activity and disturbed cell cycle. Ref.15

Mutagenesis

161

T → D: Strong reduction in kinase activity and ability to bind substrate. Strong reduction in plant growth. Sterile plants. Ref.42

Mutagenesis

161

T → V: Strong reduction in kinase activity and ability to bind substrate. Ref.42

Mutagenesis

166

T → I: Decreased kinase activity and disturbed cell cycle. Ref.15

Mutagenesis

234 – 236

Missing: No change in kinase activity, but disturbed cell cycle. Loss of intercation with CKS1. Ref.15

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Sequences

Sequence

Length

Mass (Da)

Tools

P24100-1 [UniParc].

Last modified March 1, 1992. Version 1.
Checksum: B5FAE55FA9EC366E
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FASTA

294

34,030

        10         20         30         40         50         60 
MDQYEKVEKI GEGTYGVVYK ARDKVTNETI ALKKIRLEQE DEGVPSTAIR EISLLKEMQH 

        70         80         90        100        110        120 
SNIVKLQDVV HSEKRLYLVF EYLDLDLKKH MDSTPDFSKD LHMIKTYLYQ ILRGIAYCHS 

       130        140        150        160        170        180 
HRVLHRDLKP QNLLIDRRTN SLKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSHH 

       190        200        210        220        230        240 
YSTPVDIWSV GCIFAEMISQ KPLFPGDSEI DQLFKIFRIM GTPYEDTWRG VTSLPDYKSA 

       250        260        270        280        290 
FPKWKPTDLE TFVPNLDPDG VDLLSKMLLM DPTKRINARA ALEHEYFKDL GGMP

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References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Identification of two cell-cycle-controlling cdc2 gene homologs in Arabidopsis thaliana." Hirayama T., Imajuku Y., Anai T., Matsui M., Oka A. Gene 105:159-165(1991) [PubMed: 1937013] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Strain: cv. Columbia.
[2]	"The Arabidopsis functional homolog of the p34cdc2 protein kinase." Ferreira P.C.G., Hemerly A.S., Villarroel R., van Montagu M., Inze D. Plant Cell 3:531-540(1991) [PubMed: 1840925] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Strain: cv. Columbia.
[3]	"Control of cell division in plants." Inze D., Ferreira P.C.G., Hemerly A.S., van Montagu M. Biochem. Soc. Trans. 20:80-84(1992) [PubMed: 1634002] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Strain: cv. Columbia.
[4]	"Exon-intron organization of the Arabidopsis thaliana protein kinase genes CDC2a and CDC2b." Imajuku Y., Hirayama T., Endoh H., Oka A. FEBS Lett. 304:73-77(1992) [PubMed: 1618302] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: cv. Columbia.
[5]	"Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana." Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F. Tabata S. Nature 408:820-822(2000) [PubMed: 11130713] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[6]	"Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. Ecker J.R. Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia.
[7]	"Arabidopsis ORF clones." Shinn P., Chen H., Kim C.J., Ecker J.R. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia.
[8]	"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs." Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K. Shinozaki K. Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia.
[9]	"Full-length cDNA from Arabidopsis thaliana." Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A. Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
[10]	"The Arabidopsis cyclin-dependent kinase gene cdc2bAt is preferentially expressed during S and G2 phases of the cell cycle." Segers G., Gadisseur I., Bergounioux C., de Almeida Engler J., Jacqmard A., van Montagu M., Inze D. Plant J. 10:601-612(1996) [PubMed: 8893539] [Abstract] Cited for: TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.
[11]	"Induction of cdc2a and cyc1At expression in Arabidopsis thaliana during early phases of nematode-induced feeding cell formation." Niebel A., de Almeida Engler J., Hemerly A.S., Ferreira P.C.G., Inze D., van Montagu M., Gheysen G. Plant J. 10:1037-1043(1996) [PubMed: 9011085] [Abstract] Cited for: INDUCTION.
[12]	"The Arabidopsis Cks1At protein binds the cyclin-dependent kinases Cdc2aAt and Cdc2bAt." de Veylder L., Segers G., Glab N., Casteels P., van Montagu M., Inze D. FEBS Lett. 412:446-452(1997) [PubMed: 9276444] [Abstract] Cited for: INTERACTION WITH CKS1.
[13]	"A plant cyclin-dependent kinase inhibitor gene." Wang H., Fowke L.C., Crosby W.L. Nature 386:451-452(1997) [PubMed: 9087400] [Abstract] Cited for: INTERACTION WITH KRP1/ICK1.
[14]	"ICK1, a cyclin-dependent protein kinase inhibitor from Arabidopsis thaliana interacts with both Cdc2a and CycD3, and its expression is induced by abscisic acid." Wang H., Qi Q., Schorr P., Cutler A.J., Crosby W.L., Fowke L.C. Plant J. 15:501-510(1998) [PubMed: 9753775] [Abstract] Cited for: INTERACTION WITH KRP1/ICK1 AND CYCD3-1.
[15]	"Mutational analysis of two Arabidopsis thaliana cyclin-dependent kinases in fission yeast." Porceddu A., de Veylder L., Hayles J., van Montagu M., Inze D., Mironov V. FEBS Lett. 446:182-188(1999) [PubMed: 10100639] [Abstract] Cited for: INTERACTION WITH CKS1 AND CYCD1-1, MUTAGENESIS OF THR-14; TYR-15; ASP-146; PRO-156; THR-166 AND 234-LEU--ASP-236.
[16]	"A new D-type cyclin of Arabidopsis thaliana expressed during lateral root primordia formation." de Veylder L., de Almeida Engler J., Burssens S., Manevski A., Lescure B., van Montagu M., Engler G., Inze D. Planta 208:453-462(1999) [PubMed: 10420643] [Abstract] Cited for: INTERACTION WITH CYCD4-1.
[17]	"An Arabidopsis cell cycle-dependent kinase-related gene, CDC2b, plays a role in regulating seedling growth in darkness." Yoshizumi T., Nagata N., Shimada H., Matsui M. Plant Cell 11:1883-1896(1999) [PubMed: 10521519] [Abstract] Cited for: DEVELOPMENTAL STAGE.
[18]	"Expression of cell cycle regulatory genes and morphological alterations in response to salt stress in Arabidopsis thaliana." Burssens S., Himanen K., van de Cotte B., Beeckman T., van Montagu M., Inze D., Verbruggen N. Planta 211:632-640(2000) [PubMed: 11089675] [Abstract] Cited for: INDUCTION.
[19]	"The Arabidopsis Cdc2a-interacting protein ICK2 is structurally related to ICK1 and is a potent inhibitor of cyclin-dependent kinase activity in vitro." Lui H., Wang H., Delong C., Fowke L.C., Crosby W.L., Fobert P.R. Plant J. 21:379-385(2000) [PubMed: 10758489] [Abstract] Cited for: INTERACTION WITH KRP2/ICK2.
[20]	"Cell division events are essential for embryo patterning and morphogenesis: studies on dominant-negative cdc2aAt mutants of Arabidopsis." Hemerly A.S., Ferreira P.C.G., van Montagu M., Engler G., Inze D. Plant J. 23:123-130(2000) [PubMed: 10929107] [Abstract] Cited for: FUNCTION, MUTAGENESIS OF ASP-146.
[21]	"The Arabidopsis D-type cyclins CycD2 and CycD3 both interact in vivo with the PSTAIRE cyclin-dependent kinase Cdc2a but are differentially controlled." Healy J.M.S., Menges M., Doonan J.H., Murray J.A.H. J. Biol. Chem. 276:7041-7047(2001) [PubMed: 11096103] [Abstract] Cited for: INTERACTION WITH CYCD2-1 AND CYCD3-1.
[22]	"Functional analysis of cyclin-dependent kinase inhibitors of Arabidopsis." de Veylder L., Beeckman T., Beemster G.T.S., Krols L., Terras F., Landrieu I., van der Schueren E., Maes S., Naudts M., Inze D. Plant Cell 13:1653-1667(2001) [PubMed: 11449057] [Abstract] Cited for: INTERACTION WITH KRP1/ICK1; KRP2/ICK2; KRP3/ICK6; KRP4/ICK7; KRP6/ICK4 AND KRP7/ICK5.
[23]	"CKS1At overexpression in Arabidopsis thaliana inhibits growth by reducing meristem size and inhibiting cell-cycle progression." de Veylder L., Beemster G.T.S., Beeckman T., Inze D. Plant J. 25:617-626(2001) [PubMed: 11319029] [Abstract] Cited for: INTERACTION WITH CKS1.
[24]	"A cell-cycle-regulated kinase activity phosphorylates plant retinoblastoma protein and contains, in Arabidopsis, a CDKA/cyclin D complex." Boniotti M.B., Gutierrez C. Plant J. 28:341-350(2001) [PubMed: 11722776] [Abstract] Cited for: INTERACTION WITH CYCD2-1.
[25]	"Genome-wide analysis of core cell cycle genes in Arabidopsis." Vandepoele K., Raes J., de Veylder L., Rouze P., Rombauts S., Inze D. Plant Cell 14:903-916(2002) [PubMed: 11971144] [Abstract] Cited for: GENE FAMILY, NOMENCLATURE.
[26]	"Misexpression of the cyclin-dependent kinase inhibitor ICK1/KRP1 in single-celled Arabidopsis trichomes reduces endoreduplication and cell size and induces cell death." Schnittger A., Weinl C., Bouyer D., Schoebinger U., Huelskamp M. Plant Cell 15:303-315(2003) [PubMed: 12566574] [Abstract] Cited for: INTERACTION WITH KRP1/ICK1.
[27]	"Arabidopsis D-type cyclin CYCD4;1 is a novel cyclin partner of B2-type cyclin-dependent kinase." Kono A., Umeda-Hara C., Lee J., Ito M., Uchimiya H., Umeda M. Plant Physiol. 132:1315-1321(2003) [PubMed: 12857813] [Abstract] Cited for: INTERACTION WITH CYCD4-1.
[28]	"In vivo interaction between CDKA and eIF4A: a possible mechanism linking translation and cell proliferation." Hutchins A.P., Roberts G.R., Lloyd C.W., Doonan J.H. FEBS Lett. 556:91-94(2004) [PubMed: 14706832] [Abstract] Cited for: INTERACTION WITH TIF4A-1/EIF4A-1.
[29]	"Molecular characterization of Arabidopsis PHO80-like proteins, a novel class of CDKA;1-interacting cyclins." Torres Acosta J.A., de Almeida Engler J., Raes J., Magyar Z., de Groodt R., Inze D., de Veylder L. Cell. Mol. Life Sci. 61:1485-1497(2004) [PubMed: 15197472] [Abstract] Cited for: INTERACTION WITH CYCU1-1; CYCU2-1; CYCU2-2; CYCU3-1; CYCU4-1; CYCU4-2 AND CYCU4-3.
[30]	"The plant-specific kinase CDKF;1 is involved in activating phosphorylation of cyclin-dependent kinase-activating kinases in Arabidopsis." Shimotohno A., Umeda-Hara C., Bisova K., Uchimiya H., Umeda M. Plant Cell 16:2954-2966(2004) [PubMed: 15486101] [Abstract] Cited for: INTERACTION WITH CYCH1-1.
[31]	"The cyclin-dependent kinase inhibitor KRP2 controls the onset of the endoreduplication cycle during Arabidopsis leaf development through inhibition of mitotic CDKA;1 kinase complexes." Verkest A., de Oliveira Manes C.L., Vercruysse S., Maes S., van der Schueren E., Beeckman T., Genschik P., Kuiper M., Inze D., de Veylder L. Plant Cell 17:1723-1736(2005) [PubMed: 15863515] [Abstract] Cited for: ENZYME REGULATION, INTERACTION WITH KRP2/ICK2.
[32]	"Cell cycle regulation in plant development." Inze D., de Veylder L. Annu. Rev. Genet. 40:77-105(2006) [PubMed: 17094738] [Abstract] Cited for: REVIEW.
[33]	"Arabidopsis KRPs have distinct inhibitory activity toward cyclin D2-associated kinases, including plant-specific B-type cyclin-dependent kinase." Nakai T., Kato K., Shinmyo A., Sekine M. FEBS Lett. 580:336-340(2006) [PubMed: 16376885] [Abstract] Cited for: ENZYME REGULATION.
[34]	"The A-type cyclin CYCA2;3 is a key regulator of ploidy levels in Arabidopsis endoreduplication." Imai K.K., Ohashi Y., Tsuge T., Yoshizumi T., Matsui M., Oka A., Aoyama T. Plant Cell 18:382-396(2006) [PubMed: 16415207] [Abstract] Cited for: SUBCELLULAR LOCATION, INTERACTION WITH CYCA2-3.
[35]	"The D-type cyclin CYCD3;1 is limiting for the G1-to-S-phase transition in Arabidopsis." Menges M., Samland A.K., Planchais S., Murray J.A.H. Plant Cell 18:893-906(2006) [PubMed: 16517759] [Abstract] Cited for: INTERACTION WITH CYCD3-1.
[36]	"Arabidopsis PASTICCINO2 is an antiphosphatase involved in regulation of cyclin-dependent kinase A." Da Costa M., Bach L., Landrieu I., Bellec Y., Catrice O., Brown S., De Veylder L., Lippens G., Inze D., Faure J.-D. Plant Cell 18:1426-1437(2006) [PubMed: 16698944] [Abstract] Cited for: INTERACTION WITH PAS2.
[37]	"A distinct type of cyclin D, CYCD4;2, involved in the activation of cell division in Arabidopsis." Kono A., Ohno R., Umeda-Hara C., Uchimiya H., Umeda M. Plant Cell Rep. 25:540-545(2006) [PubMed: 16408177] [Abstract] Cited for: INTERACTION WITH CYCD4-2.
[38]	"Arabidopsis CDKA;1, a cdc2 homologue, controls proliferation of generative cells in male gametogenesis." Iwakawa H., Shinmyo A., Sekine M. Plant J. 45:819-831(2006) [PubMed: 16460514] [Abstract] Cited for: FUNCTION, DISRUPTION PHENOTYPE.
[39]	"Diverse phosphoregulatory mechanisms controlling cyclin-dependent kinase-activating kinases in Arabidopsis." Shimotohno A., Ohno R., Bisova K., Sakaguchi N., Huang J., Koncz C., Uchimiya H., Umeda M. Plant J. 47:701-710(2006) [PubMed: 16856985] [Abstract] Cited for: ENZYME REGULATION, PHOSPHORYLATION, INTERACTION WITH CYCH1-1, MUTAGENESIS OF TYR-15.
[40]	"Molecular control of nuclear and subnuclear targeting of the plant CDK inhibitor ICK1 and ICK1-mediated nuclear transport of CDKA." Zhou Y., Niu H., Brandizzi F., Fowke L.C., Wang H. Plant Mol. Biol. 62:261-278(2006) [PubMed: 16845478] [Abstract] Cited for: SUBCELLULAR LOCATION, INTERACTION WITH KRP1/ICK1.
[41]	"Arabidopsis WEE1 kinase controls cell cycle arrest in response to activation of the DNA integrity checkpoint." de Schutter K., Joubes J., Cools T., Verkest A., Corellou F., Babiychuk E., van der Schueren E., Beeckman T., Kushnir S., Inze D., de Veylder L. Plant Cell 19:211-225(2007) [PubMed: 17209125] [Abstract] Cited for: INDUCTION, PHOSPHORYLATION, INTERACTION WITH WEE1.
[42]	"T-loop phosphorylation of Arabidopsis CDKA;1 is required for its function and can be partially substituted by an aspartate residue." Dissmeyer N., Nowack M.K., Pusch S., Stals H., Inze D., Grini P.E., Schnittger A. Plant Cell 19:972-985(2007) [PubMed: 17369369] [Abstract] Cited for: FUNCTION, PHOSPHORYLATION AT THR-161, MUTAGENESIS OF THR-161.
[43]	"Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis." de la Fuente van Bentem S., Anrather D., Dohnal I., Roitinger E., Csaszar E., Joore J., Buijnink J., Carreri A., Forzani C., Lorkovic Z.J., Barta A., Lecourieux D., Verhounig A., Jonak C., Hirt H. J. Proteome Res. 7:2458-2470(2008) [PubMed: 18433157] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-161, MASS SPECTROMETRY.

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Cross-references

Sequence databases
	M59198 mRNA. Translation: AAA32831.1. S45387 mRNA. Translation: AAB23643.1. X57839 mRNA. Translation: CAA40971.1. D10850 Genomic DNA. Translation: BAA01623.1. AL132963 Genomic DNA. Translation: CAB87903.1. Sequence problems. AY090353 mRNA. Translation: AAL91258.1. Frameshift. BT024706 mRNA. Translation: ABD59044.1. AK226373 mRNA. Translation: BAE98520.1. AY085153 mRNA. Translation: AAM61706.1.
IPI	IPI00521649.
PIR	S23095. T49271.
RefSeq	NP_566911.1.
UniGene	At.24166
3D structure databases
HSSP	HSSP built from PDB template 1P2A based on UniProtKB P24941.
ModBase	Search...
Protein-protein interaction databases
IntAct	P24100. 43 interactions.
Proteomic databases
PRIDE	P24100.
Genome annotation databases
GeneID	824036.
GenomeReviews	Gene locus AT3G48750 in contig BA000014_GR.
KEGG	ath:AT3G48750.
NMPDR	fig\|3702.1.peg.16115.
Organism-specific databases
GeneFarm	2945. 106.
TAIR	At3g48750.
Phylogenomic databases
OMA	P24100. YDPAHRI.
Enzyme and pathway databases
BRENDA	2.7.11.22. 302. 2.7.11.23. 302.
Gene expression databases
ArrayExpress	P24100.
GermOnline	AT3G48750. Arabidopsis thaliana.
Family and domain databases
InterPro	IPR000719. Prot_kinase_core. IPR017441. Protein_kinase_ATP_BS. IPR017442. Se/Thr_pkinase-rel. IPR008271. Ser_thr_pkin_AS. IPR002290. Ser_thr_pkinase. [Graphical view]
Pfam	PF00069. Pkinase. 1 hit. [Graphical view]
ProDom	PD000001. Prot_kinase. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00220. S_TKc. 1 hit. [Graphical view]
PROSITE	PS00107. PROTEIN_KINASE_ATP. 1 hit. PS50011. PROTEIN_KINASE_DOM. 1 hit. PS00108. PROTEIN_KINASE_ST. 1 hit. [Graphical view]
ProtoNet	Search...

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Entry information

Entry name

CDKA1_ARATH

Accession

Primary (citable) accession number: P24100
Secondary accession number(s): Q29Q50, Q8RX68, Q9M307

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 1, 1992
Last sequence update:	March 1, 1992
Last modified:	June 16, 2009
This is version 86 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

PPAP (Plant Proteome Annotation Project)

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Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Binary interactions

With

Entry

#Exp.

IntAct

Notes

Sequence annotation (Features)

Molecule processing

Regions

Sites

Amino acid modifications

Experimental info

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Proteomic databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Enzyme and pathway databases

Gene expression databases

Family and domain databases

Entry information

Relevant documents