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Protein

Endochitinase B

Gene

CHN50

Organism
Nicotiana tabacum (Common tobacco)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Defense against chitin-containing fungal pathogens.

Catalytic activityi

Random endo-hydrolysis of N-acetyl-beta-D-glucosaminide (1->4)-beta-linkages in chitin and chitodextrins.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidase, Hydrolase, Pathogenesis-related protein
Biological processCarbohydrate metabolism, Chitin degradation, Hypersensitive response, Plant defense, Polysaccharide degradation
LigandChitin-binding

Protein family/group databases

CAZyiCBM18. Carbohydrate-Binding Module Family 18.
GH19. Glycoside Hydrolase Family 19.

Names & Taxonomyi

Protein namesi
Recommended name:
Endochitinase B (EC:3.2.1.14)
Short name:
CHN-B
Gene namesi
Name:CHN50
OrganismiNicotiana tabacum (Common tobacco)
Taxonomic identifieri4097 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeNicotianoideaeNicotianeaeNicotiana
Proteomesi
  • UP000084051 Componenti: Genome assembly

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Vacuole

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 231 PublicationAdd BLAST23
ChainiPRO_000000533224 – 317Endochitinase BAdd BLAST294
PropeptideiPRO_0000005333318 – 324Removed in mature formCurated7

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi26 ↔ 41PROSITE-ProRule annotation
Disulfide bondi35 ↔ 47PROSITE-ProRule annotation
Disulfide bondi40 ↔ 54PROSITE-ProRule annotation
Disulfide bondi59 ↔ 63PROSITE-ProRule annotation
Modified residuei674-hydroxyproline1 Publication1
Modified residuei694-hydroxyproline1 Publication1
Disulfide bondi96 ↔ 158PROSITE-ProRule annotation
Disulfide bondi170 ↔ 178PROSITE-ProRule annotation
Disulfide bondi277 ↔ 309PROSITE-ProRule annotation

Post-translational modificationi

The 4-hydroxyproline residues are not glycosylated in this plant vacuolar protein.

Keywords - PTMi

Disulfide bond, Hydroxylation

Proteomic databases

PRIDEiP24091.

Expressioni

Inductioni

By ethylene.

Structurei

3D structure databases

ProteinModelPortaliP24091.
SMRiP24091.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini24 – 65Chitin-binding type-1PROSITE-ProRule annotationAdd BLAST42

Sequence similaritiesi

Keywords - Domaini

Signal

Family and domain databases

CDDicd00325. chitinase_glyco_hydro_19. 1 hit.
Gene3Di3.30.60.10. 1 hit.
InterProiView protein in InterPro
IPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR016283. Glyco_hydro_19.
IPR000726. Glyco_hydro_19_cat.
IPR023346. Lysozyme-like_dom.
PfamiView protein in Pfam
PF00187. Chitin_bind_1. 1 hit.
PF00182. Glyco_hydro_19. 1 hit.
PIRSFiPIRSF001060. Endochitinase. 1 hit.
PRINTSiPR00451. CHITINBINDNG.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD000609. Chitin_bd_1. 1 hit.
SMARTiView protein in SMART
SM00270. ChtBD1. 1 hit.
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiView protein in PROSITE
PS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
PS00773. CHITINASE_19_1. 1 hit.
PS00774. CHITINASE_19_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P24091-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLREFTALS SLLFSLLLLS ASAEQCGSQA GGARCASGLC CSKFGWCGNT
60 70 80 90 100
NDYCGPGNCQ SQCPGGPTPP GGGDLGSIIS SSMFDQMLKH RNDNACQGKG
110 120 130 140 150
FYSYNAFINA ARSFPGFGTS GDTTARKREI AAFFAQTSHE TTGGWATAPD
160 170 180 190 200
GPYAWGYCWL REQGSPGDYC TPSGQWPCAP GRKYFGRGPI QISHNYNYGP
210 220 230 240 250
CGRAIGVDLL NNPDLVATDP VISFKSALWF WMTPQSPKPS CHDVIIGRWQ
260 270 280 290 300
PSSADRAANR LPGFGVITNI INGGLECGRG TDSRVQDRIG FYRRYCSILG
310 320
VSPGDNLDCG NQRSFGNGLL VDTM
Length:324
Mass (Da):34,721
Last modified:March 1, 1992 - v1
Checksum:iFA65DC2113B33EB6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X51599 Genomic DNA. Translation: CAA35945.1.
X64519 Genomic DNA. Translation: CAA45822.1.
M15173 mRNA. Translation: AAA34070.1.
PIRiS20981.
RefSeqiXP_016509308.1. XM_016653822.1.
UniGeneiNta.4173.

Genome annotation databases

GeneIDi107826794.
KEGGinta:107826794.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiCHI2_TOBAC
AccessioniPrimary (citable) accession number: P24091
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 1, 1992
Last sequence update: March 1, 1992
Last modified: May 10, 2017
This is version 113 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families