Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

P24082

- TRAN_ECOLI

UniProt

P24082 - TRAN_ECOLI

Protein

Protein TraN

Gene

traN

Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 78 (01 Oct 2014)
      Sequence version 2 (01 Feb 1995)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Essential for F plasmid conjugative transfer. May interact with the recipient cell surface to stabilize mating pairs initiated by F-pili. May interact with TraG.

    GO - Biological processi

    1. conjugation Source: UniProtKB-KW

    Keywords - Biological processi

    Conjugation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein TraN
    Gene namesi
    Name:traN
    Ordered Locus Names:ECOK12F089
    Encoded oniPlasmid F0 Publication
    OrganismiEscherichia coli (strain K12)
    Taxonomic identifieri83333 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

    Subcellular locationi

    Cell outer membrane 1 Publication

    GO - Cellular componenti

    1. cell outer membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell outer membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 1818Sequence AnalysisAdd
    BLAST
    Chaini19 – 602584Protein TraNPRO_0000024508Add
    BLAST

    Proteomic databases

    PRIDEiP24082.

    Expressioni

    Gene expression databases

    GenevestigatoriP24082.

    Structurei

    3D structure databases

    ProteinModelPortaliP24082.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    Signal

    Phylogenomic databases

    OMAiQESIPGY.

    Family and domain databases

    InterProiIPR014121. TraN_Ftype.
    [Graphical view]
    PfamiPF06986. TraN. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02750. TraN_Ftype. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P24082-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKRILPLILA LVAGMAQADS NSDYRAGSDF AHQIKGQGSS SIQGFKPQES    50
    IPGYNANPDE TKYYGGVTAG GDGGLKNDGT TEWATGETGK TITESFMNKP 100
    KDILSPDAPF IQTGRDVVNR ADSIVGNTGQ QCSAQEISRS EYTNYTCERD 150
    LQVEQYCTRT ARMELQGSTT WETRTLEYEM SQLPAREVNG QYVVSITSPV 200
    TGEIVDAHYS WSRTYLQKSV PMTITVLGTP LSWNAKYSAD ASFTPVQKTL 250
    TAGVAFTSSH PVRVGNTKFK RHTAMKLRLV VRVKKASYTP YVVWSESCPF 300
    SKELGKLTKT ECTEAGGNRT LVKDGQSYSM YQSCWAYRDT YVTQSADKGT 350
    CQTYTDNPAC TLVSHQCAFY SEEGACLHEY ATYSCESKTS GKVMVCGGDV 400
    FCLDGECDKA QSGKSNDFAE AVSQLAALAA AGKDVAALNG VDVRAFTGQA 450
    KFCKKAAAGY SNCCKDSGWG QDIGLAKCSS DEKALAKAKS NKLTVSVGEF 500
    CSKKVLGVCL EKKRSYCQFD SKLAQIVQQQ GRNGQLRISF GSAKHPDCRG 550
    ITVDELQKIQ FNRLDFTNFY EDLMNNQKIP DSGVLTQKVK EQIADQLKQA 600
    GQ 602
    Length:602
    Mass (Da):65,715
    Last modified:February 1, 1995 - v2
    Checksum:i78B97716681FF50E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X61575 Genomic DNA. Translation: CAA43775.1.
    U01159 Genomic DNA. Translation: AAC44192.1.
    AP001918 Genomic DNA. Translation: BAA97959.1.
    M60427 Genomic DNA. Translation: AAA24915.1.
    PIRiS23991.
    RefSeqiNP_061468.1. NC_002483.1.
    WP_000821835.1. NC_002483.1.

    Genome annotation databases

    GeneIDi1263575.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X61575 Genomic DNA. Translation: CAA43775.1 .
    U01159 Genomic DNA. Translation: AAC44192.1 .
    AP001918 Genomic DNA. Translation: BAA97959.1 .
    M60427 Genomic DNA. Translation: AAA24915.1 .
    PIRi S23991.
    RefSeqi NP_061468.1. NC_002483.1.
    WP_000821835.1. NC_002483.1.

    3D structure databases

    ProteinModelPortali P24082.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi P24082.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 1263575.

    Phylogenomic databases

    OMAi QESIPGY.

    Gene expression databases

    Genevestigatori P24082.

    Family and domain databases

    InterProi IPR014121. TraN_Ftype.
    [Graphical view ]
    Pfami PF06986. TraN. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02750. TraN_Ftype. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Characterization of the F plasmid mating aggregation gene traN and of a new F transfer region locus trbE."
      Maneewannakul S., Kathir P., Ippen-Ihler K.
      J. Mol. Biol. 225:299-311(1992) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], SUBCELLULAR LOCATION.
      Strain: K12.
    2. "Analysis of the sequence and gene products of the transfer region of the F sex factor."
      Frost L.S., Ippen-Ihler K., Skurray R.A.
      Microbiol. Rev. 58:162-210(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    3. "Complete nucleotide sequence of the F plasmid: its implications for organization and diversification of plasmid genomes."
      Shimizu H., Saitoh Y., Suda Y., Uehara K., Sampei G., Mizobuchi K.
      Submitted (APR-2000) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / CR63.
    4. "Characterization of trbC, a new F plasmid tra operon gene that is essential to conjugative transfer."
      Maneewannakul S., Maneewannakul K., Ippen-Ihler K.
      J. Bacteriol. 173:3872-3878(1991) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-19.
      Strain: K12.

    Entry informationi

    Entry nameiTRAN_ECOLI
    AccessioniPrimary (citable) accession number: P24082
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 1, 1992
    Last sequence update: February 1, 1995
    Last modified: October 1, 2014
    This is version 78 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Plasmid

    External Data

    Dasty 3